Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
O00370 RNA5SP387-201ENST00000364226 106 ntBASIC3.58□□□□□ -1.84
O00370 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
O00370 RAP1BP1-201ENST00000412709 553 ntBASIC3.58□□□□□ -1.84
O00370 FNDC3CP-201ENST00000420795 1155 ntBASIC3.58□□□□□ -1.84
O00370 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.58□□□□□ -1.84
O00370 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.58□□□□□ -1.84
O00370 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.58□□□□□ -1.84
O00370 MTCYBP11-201ENST00000447254 1109 ntBASIC3.58□□□□□ -1.84
O00370 AC008264.1-201ENST00000447612 367 ntBASIC3.58□□□□□ -1.84
O00370 RPL23AP35-201ENST00000451906 501 ntBASIC3.58□□□□□ -1.84
O00370 AL109741.2-201ENST00000455561 343 ntBASIC3.58□□□□□ -1.84
O00370 HMGN1P18-201ENST00000457642 277 ntBASIC3.58□□□□□ -1.84
O00370 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
O00370 PABPC1P3-201ENST00000469174 459 ntBASIC3.58□□□□□ -1.84
O00370 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
O00370 AP002884.2-201ENST00000471647 395 ntBASIC3.58□□□□□ -1.84
O00370 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
O00370 KLRA1P-201ENST00000503499 986 ntBASIC3.58□□□□□ -1.84
O00370 AC114967.1-201ENST00000504890 259 ntBASIC3.58□□□□□ -1.84
O00370 MTCYBP43-201ENST00000513621 740 ntBASIC3.58□□□□□ -1.84
O00370 AC107934.2-201ENST00000518653 310 ntBASIC3.58□□□□□ -1.84
O00370 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.58□□□□□ -1.84
O00370 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
O00370 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.58□□□□□ -1.84
O00370 AC024224.1-201ENST00000538284 609 ntBASIC3.58□□□□□ -1.84
O00370 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.58□□□□□ -1.84
O00370 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.58□□□□□ -1.84
O00370 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.58□□□□□ -1.84
O00370 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.58□□□□□ -1.84
O00370 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.58□□□□□ -1.84
O00370 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.58□□□□□ -1.84
O00370 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.58□□□□□ -1.84
O00370 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
O00370 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
O00370 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
O00370 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
O00370 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
O00370 AC007496.3-201ENST00000624987 3443 ntBASIC3.57□□□□□ -1.84
O00370 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
O00370 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
O00370 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
O00370 Y_RNA.169-201ENST00000363745 96 ntBASIC3.57□□□□□ -1.84
O00370 RNU6-621P-201ENST00000364752 109 ntBASIC3.57□□□□□ -1.84
O00370 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 RNU6-821P-201ENST00000390995 107 ntBASIC3.57□□□□□ -1.84
O00370 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.57□□□□□ -1.84
O00370 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
O00370 BX323014.1-201ENST00000412876 237 ntBASIC3.57□□□□□ -1.84
O00370 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 MTCO1P12-201ENST00000414273 1543 ntBASIC3.57□□□□□ -1.84
O00370 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.57□□□□□ -1.84
O00370 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.57□□□□□ -1.84
O00370 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 AC006548.1-201ENST00000427470 102 ntBASIC3.57□□□□□ -1.84
O00370 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
O00370 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.57□□□□□ -1.84
O00370 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 MTND2P20-201ENST00000440805 661 ntBASIC3.57□□□□□ -1.84
O00370 AL591503.2-201ENST00000442314 1005 ntBASIC3.57□□□□□ -1.84
O00370 ATG12P2-201ENST00000456830 416 ntBASIC3.57□□□□□ -1.84
O00370 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.57□□□□□ -1.84
O00370 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 CENPBD1P1-201ENST00000464061 469 ntBASIC3.57□□□□□ -1.84
O00370 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.57□□□□□ -1.84
O00370 AC104685.1-201ENST00000502445 371 ntBASIC3.57□□□□□ -1.84
O00370 TMEM251P1-201ENST00000503717 318 ntBASIC3.57□□□□□ -1.84
O00370 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.57□□□□□ -1.84
O00370 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 RNU1-61P-201ENST00000516107 151 ntBASIC3.57□□□□□ -1.84
O00370 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 AC104027.1-201ENST00000521887 300 ntBASIC3.57□□□□□ -1.84
O00370 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 CR383658.2-201ENST00000547576 1525 ntBASIC3.57□□□□□ -1.84
O00370 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.57□□□□□ -1.84
O00370 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.57□□□□□ -1.84
O00370 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 AP001029.3-201ENST00000588063 596 ntBASIC3.57□□□□□ -1.84
O00370 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 AC107294.3-201ENST00000609211 526 ntBASIC3.57□□□□□ -1.84
O00370 AC069200.1-201ENST00000609511 323 ntBASIC3.57□□□□□ -1.84
O00370 AC006329.2-201ENST00000611491 394 ntBASIC3.57□□□□□ -1.84
O00370 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
O00370 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.57□□□□□ -1.84
O00370 AC018755.4-201ENST00000619715 454 ntBASIC3.57□□□□□ -1.84
O00370 AC079416.3-201ENST00000624479 549 ntBASIC3.57□□□□□ -1.84
O00370 CR381572.1-201ENST00000625098 102 ntBASIC3.57□□□□□ -1.84
O00370 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.57□□□□□ -1.84
O00370 CYP3A51P-201ENST00000633513 256 ntBASIC3.57□□□□□ -1.84
O00370 AL390862.1-201ENST00000635467 1469 ntBASIC3.57□□□□□ -1.84
O00370 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 AL353746.1-201ENST00000566293 6881 ntBASIC3.57□□□□□ -1.84
O00370 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
O00370 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
O00370 AC116096.1-201ENST00000566804 2314 ntBASIC3.56□□□□□ -1.84
O00370 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms