Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC048347.1-201ENST00000624621 427 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 U6.95-201ENST00000636931 70 ntBASIC5.4□□□□□ -1.54
RNF223E7ERA6 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF223E7ERA6 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 LPAL2-203ENST00000454031 2498 ntBASIC5.4□□□□□ -1.55
RNF223E7ERA6 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF223E7ERA6 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF223E7ERA6 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RNF223E7ERA6 AC099654.2-201ENST00000433031 1980 ntBASIC5.4□□□□□ -1.55
RNF223E7ERA6 AL353743.1-202ENST00000431724 1695 ntBASIC5.4□□□□□ -1.55
RNF223E7ERA6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF223E7ERA6 MAPK10-323ENST00000641493 3207 ntBASIC5.4□□□□□ -1.55
RNF223E7ERA6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RNF223E7ERA6 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC005839.1-201ENST00000624148 3213 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 RNA5SP234-201ENST00000363916 119 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 SNORA72.2-201ENST00000365028 127 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 HLFP1-201ENST00000402375 499 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 AL160275.2-201ENST00000412010 394 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC094019.1-201ENST00000434678 472 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 AF186996.7-201ENST00000492781 209 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 BTF3L4P4-201ENST00000506381 449 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC002545.1-201ENST00000592511 181 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 FAM27E2-201ENST00000619668 403 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 MIR6886-201ENST00000619864 61 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC092628.2-201ENST00000622492 339 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.39□□□□□ -1.55
RNF223E7ERA6 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF223E7ERA6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF223E7ERA6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 SRP72P2-201ENST00000344851 1979 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF223E7ERA6 Y_RNA.319-201ENST00000365138 92 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 RNU5E-7P-201ENST00000365290 117 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 SNORA51.9-201ENST00000384295 124 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 SNORA17A-201ENST00000391185 133 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 RN7SKP281-201ENST00000410472 352 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 CYCSP32-201ENST00000440548 321 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 RPL7AP61-201ENST00000443410 636 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC097463.1-201ENST00000447288 481 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 BX276092.4-201ENST00000452056 248 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC108161.1-201ENST00000461060 402 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 RPS29P24-201ENST00000486345 171 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC025458.1-201ENST00000506046 166 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 RNU6-966P-201ENST00000516479 104 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC021269.2-201ENST00000532318 330 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 AC109810.1-201ENST00000534066 224 ntBASIC5.38□□□□□ -1.55
RNF223E7ERA6 NACAP3-201ENST00000552100 481 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms