Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC027309.2-201ENST00000520566 192 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 OR4R2P-201ENST00000530815 597 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 MIR5194-201ENST00000582634 120 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AL137843.1-201ENST00000605078 385 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AC008083.4-201ENST00000615076 444 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 LINC00216-201ENST00000623548 1126 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 ZNF271P-202ENST00000465539 1970 ntBASIC1.92□□□□□ -2.1
TRAV3A0A0B4J244 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC244517.1-201ENST00000606030 2086 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC138915.1-201ENST00000565427 1685 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC062016.1-201ENST00000355719 319 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 RNU6-1249P-201ENST00000363237 111 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 SNORA80A-201ENST00000363922 136 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 OR5H15-201ENST00000383696 930 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 RNU6-730P-201ENST00000383954 104 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 RNU6-1027P-201ENST00000383998 107 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 MIR196B-201ENST00000384852 84 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL122016.1-201ENST00000403365 367 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 RNU4-78P-201ENST00000410940 126 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC099677.1-201ENST00000420575 175 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL590664.1-201ENST00000448065 339 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 OR51B8P-201ENST00000449892 769 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 RPL36AP51-201ENST00000487216 318 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 HMGB1P46-201ENST00000520062 610 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 UBTFL10-201ENST00000528532 562 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC078814.3-201ENST00000553036 491 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC007336.1-201ENST00000576365 3828 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 GLUD1P4-201ENST00000590914 418 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 RPL12P50-201ENST00000603116 116 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL049779.4-201ENST00000604500 156 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL133507.1-201ENST00000605269 557 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC067747.1-201ENST00000608026 250 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 U4.3-201ENST00000621047 82 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AC095031.1-201ENST00000623685 672 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 AL160394.1-201ENST00000624765 724 ntBASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRAV3A0A0B4J244 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
TRAV3A0A0B4J244 AC099654.7-201ENST00000635788 2127 ntBASIC1.9□□□□□ -2.1
TRAV3A0A0B4J244 RPL21P132-201ENST00000331267 462 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 RNU1-138P-201ENST00000384093 164 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 Y_RNA.510-201ENST00000384511 114 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 SNORA1.3-201ENST00000384676 136 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AL359511.1-201ENST00000402970 211 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC092745.2-202ENST00000411880 369 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 FNDC3CP-201ENST00000420795 1155 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC009961.3-201ENST00000449832 765 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AL109741.2-201ENST00000455561 343 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 SNORA59A-201ENST00000459326 152 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC073901.1-201ENST00000462471 408 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC004924.1-201ENST00000480160 781 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC010486.1-201ENST00000511793 424 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 RNA5SP148-201ENST00000516527 94 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC083923.1-201ENST00000523708 376 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC018630.1-201ENST00000541376 925 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC090666.1-201ENST00000578241 445 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC020895.1-201ENST00000595362 272 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC007998.5-201ENST00000622938 237 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AP003485.2-201ENST00000623636 610 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC092608.3-201ENST00000625017 386 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 AC083865.1-201ENST00000636634 831 ntBASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
TRAV3A0A0B4J244 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV3A0A0B4J244 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms