Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MTND4P8-201ENST00000514997 1362 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 OR6C69P-201ENST00000394268 893 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AL138827.1-201ENST00000402666 306 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 RNA5SP231-201ENST00000410496 138 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 RNA5SP270-201ENST00000411361 118 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 HMGB1P11-201ENST00000413899 637 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 TATDN1P1-201ENST00000414123 891 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 RPL26P29-201ENST00000415623 438 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC005005.2-201ENST00000420779 380 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 PGBD4P6-201ENST00000421501 610 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC069157.1-201ENST00000421749 137 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 EIF4EP4-201ENST00000424916 578 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 MTATP6P11-201ENST00000428071 670 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AL512649.1-201ENST00000428997 581 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC016712.1-201ENST00000431088 378 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 MTCYBP45-201ENST00000435243 565 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC004383.1-201ENST00000438135 289 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 RPL21P23-201ENST00000446654 460 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC104687.1-201ENST00000485829 412 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC111193.1-201ENST00000504097 155 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC118465.1-201ENST00000513820 1271 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 SNORA70.16-201ENST00000516390 95 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 SNORA31.25-201ENST00000517242 134 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC067904.2-201ENST00000517322 1283 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 HMGN1P28-201ENST00000521340 364 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC092470.1-201ENST00000546187 132 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AL049870.4-201ENST00000555741 486 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 DEFB122-202ENST00000569013 197 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC011260.1-201ENST00000578420 472 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC005412.1-201ENST00000580812 1049 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 OR7E18P-201ENST00000592589 702 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC024940.4-201ENST00000605507 246 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC005296.1-201ENST00000616145 209 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 HTR1DP1-201ENST00000616500 888 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 AC016717.3-201ENST00000624730 554 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LINC01558Q9Y6Z2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RNU4-39P-201ENST00000362455 127 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RNU4-31P-201ENST00000384211 141 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RNU6-220P-201ENST00000390919 107 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 SNORA48.3-201ENST00000391081 134 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RPS4XP8-201ENST00000402039 771 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC099677.1-201ENST00000420575 175 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC234781.2-201ENST00000426370 994 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL160175.1-201ENST00000428124 247 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC018644.1-201ENST00000429934 551 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RPL36P19-201ENST00000430744 301 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC236972.1-201ENST00000433225 199 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 CLNS1AP1-201ENST00000435954 682 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RPL21P89-201ENST00000444021 467 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 CDC42P1-201ENST00000456658 548 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 RPL7P18-201ENST00000478965 734 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 OR5H5P-201ENST00000503164 928 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 NDUFB5P1-201ENST00000508134 564 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC026436.1-201ENST00000510537 270 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 HMGN1P15-201ENST00000513870 295 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC010306.1-201ENST00000523223 1117 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 HMGB1P14-201ENST00000557424 591 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC025165.5-201ENST00000602802 578 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL355877.2-201ENST00000603670 358 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 YPEL5P2-201ENST00000605553 359 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AL513477.2-201ENST00000607858 568 ntBASIC1.11□□□□□ -2.23
LINC01558Q9Y6Z2 AC133644.2-201ENST00000608142 540 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms