Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 RPL7P36-201ENST00000444633 681 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 RPS15AP1-201ENST00000457423 391 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AC087879.1-201ENST00000474343 374 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AC091860.1-201ENST00000505723 432 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 RNA5SP385-201ENST00000515947 110 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 RNU4-60P-201ENST00000517239 135 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AP001207.1-201ENST00000524051 481 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AC008277.2-201ENST00000605196 797 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 AL136164.4-201ENST00000625013 2135 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 DBF4P1-201ENST00000412976 1892 ntBASIC3.39□□□□□ -1.87
USP16Q9Y5T5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP16Q9Y5T5 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 RN7SKP123-201ENST00000410732 291 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 BMS1P22-201ENST00000414726 313 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 OOSP1P1-201ENST00000423265 274 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AC012497.1-201ENST00000429392 575 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AL590399.6-201ENST00000446396 307 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 RPL23AP31-201ENST00000456160 467 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 RPS27AP1-201ENST00000475545 471 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 TMEM248P1-201ENST00000510579 951 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 RNU1-41P-201ENST00000516161 162 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 RNU1-48P-201ENST00000516400 162 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 BNIP3P27-201ENST00000599991 412 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 HMGN2P28-201ENST00000606102 262 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 AL512427.1-201ENST00000618593 349 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.38□□□□□ -1.87
USP16Q9Y5T5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
USP16Q9Y5T5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RNU6-1243P-201ENST00000364028 107 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RNU6-1000P-201ENST00000391066 106 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AL121978.1-201ENST00000402778 359 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AL139095.1-201ENST00000404326 391 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC092638.1-201ENST00000411966 1275 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RPS3AP9-201ENST00000417027 792 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC010881.1-201ENST00000433830 235 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RNF2P1-201ENST00000442955 1010 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 NPM1P49-201ENST00000448027 714 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 Z99714.1-201ENST00000450463 807 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RNF138P1-201ENST00000502765 546 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC008837.1-201ENST00000511513 412 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RNA5SP282-201ENST00000516355 108 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 RPL7P20-201ENST00000520308 745 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC104417.1-201ENST00000523974 751 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 OR6C73P-201ENST00000546432 358 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC023825.1-201ENST00000566704 1030 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC074051.3-201ENST00000570238 358 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 MIR3908-201ENST00000579798 126 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 MIR4435-1-201ENST00000582552 80 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 MIR3605-201ENST00000583214 100 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AL049777.1-201ENST00000622740 518 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC126544.2-201ENST00000625174 749 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 AC092435.3-201ENST00000565538 3654 ntBASIC3.37□□□□□ -1.87
USP16Q9Y5T5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms