Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC073869.10-201ENST00000642016 354 ntBASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 AL034546.1-201ENST00000623740 3693 ntBASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HRH3Q9Y5N1 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RNY1-201ENST00000364228 113 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.274-201ENST00000364714 101 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RNA5SP284-201ENST00000384547 118 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 MIR1203-201ENST00000408812 85 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.793-201ENST00000411222 111 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RPL12P12-201ENST00000424633 501 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AL606753.1-201ENST00000427435 87 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC006946.1-201ENST00000429106 328 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RPEP5-201ENST00000441137 268 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 SDC4P-201ENST00000453285 601 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ACA64.1-201ENST00000459171 127 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 HMGB1P25-201ENST00000468402 607 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RN7SKP277-201ENST00000516895 283 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RNU6-840P-201ENST00000517275 65 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 OR4H12P-201ENST00000556269 907 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 MIR548AI-201ENST00000579940 88 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 MIR132-201ENST00000591554 101 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC127459.3-201ENST00000624328 466 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC132825.6-201ENST00000638861 357 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC116667.2-201ENST00000641075 823 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 AC097063.1-201ENST00000426714 1797 ntBASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HRH3Q9Y5N1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 DNM1P47-203ENST00000571780 12667 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RNU1-150P-201ENST00000362491 162 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RNU6-545P-201ENST00000362681 104 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.200-201ENST00000364018 102 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.237-201ENST00000364439 102 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AC019155.1-201ENST00000382242 574 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RNU2-14P-201ENST00000411053 191 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RN7SKP17-201ENST00000411242 351 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AC092447.6-201ENST00000414578 210 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RPS12P17-201ENST00000438591 377 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AL161636.2-201ENST00000445179 927 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AP006222.1-205ENST00000450734 457 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RPS15AP34-201ENST00000487776 387 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 AC009120.1-201ENST00000493458 473 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 RN7SL284P-201ENST00000498823 275 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 MTND3P25-201ENST00000509243 135 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.703-201ENST00000516846 111 ntBASIC5.48□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.713-201ENST00000517013 96 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms