Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNA5SP187-201ENST00000384400 119 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AL133388.1-201ENST00000404509 287 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-174P-201ENST00000410406 106 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC007679.3-201ENST00000434035 414 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 RPS11P1-201ENST00000451072 473 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL12P39-201ENST00000455456 496 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 YRDCP3-201ENST00000456507 480 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SL72P-201ENST00000460697 269 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AP000942.1-201ENST00000463969 747 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC104339.1-201ENST00000465478 348 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 RPS15AP34-201ENST00000487776 387 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 RPS4XP20-201ENST00000505751 772 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 MRPS33P2-201ENST00000507850 322 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC105384.2-201ENST00000508433 640 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 FTH1P9-201ENST00000513251 355 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 HMGB3P26-201ENST00000560051 582 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC018809.2-201ENST00000602436 3823 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC012669.1-201ENST00000603209 283 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AL161616.1-201ENST00000611867 286 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 MAPK10-328ENST00000641553 4009 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC107027.3-201ENST00000565095 3473 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC005332.5-201ENST00000591222 2919 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 PRO1804-201ENST00000623780 2050 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-1249P-201ENST00000363237 111 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 Y_RNA.126-201ENST00000363382 111 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU1-65P-201ENST00000363919 148 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU4-42P-201ENST00000364738 142 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 SNORA20.1-201ENST00000364790 130 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR625-201ENST00000385047 85 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AP000580.1-201ENST00000404439 358 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AL030996.1-201ENST00000411430 235 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL7AP73-201ENST00000413490 353 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RBMY1KP-201ENST00000423480 476 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AL353997.1-201ENST00000432936 108 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC138761.5-201ENST00000433967 325 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 MTND2P29-201ENST00000438595 412 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SL193P-201ENST00000491708 276 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SL57P-201ENST00000493687 290 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 GMPSP1-201ENST00000514075 579 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 SNORA40.15-201ENST00000516884 107 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 RNA5SP340-201ENST00000517132 107 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC144568.1-201ENST00000520139 137 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC087369.1-201ENST00000520775 996 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 CYCSP38-201ENST00000559840 322 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC009852.2-201ENST00000567898 485 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR4260-201ENST00000583107 67 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 BDH2P1-201ENST00000602288 736 ntBASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
PCDHGA11Q9Y5H2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA11Q9Y5H2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA11Q9Y5H2 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA11Q9Y5H2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms