Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FCF1P3-201ENST00000496394 590 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 ARL4AP2-201ENST00000507378 601 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AL157687.1-201ENST00000554853 619 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC068790.5-201ENST00000602741 355 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 RNA5SP108-201ENST00000605921 117 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC245517.5-201ENST00000611529 162 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 MIR6715B-201ENST00000637172 77 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 MTND5P3-201ENST00000438536 1800 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AC074029.4-201ENST00000624796 1859 ntBASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB1Q9Y5F3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-282P-201ENST00000365357 103 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 RNU11-4P-201ENST00000391149 133 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC011933.1-201ENST00000413334 321 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 TMSB10P2-201ENST00000416049 131 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC092832.1-201ENST00000422934 400 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC114755.5-201ENST00000447760 831 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AL359073.1-201ENST00000448036 403 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 RNU7-59P-201ENST00000459101 61 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC116533.1-201ENST00000459748 321 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC021146.3-201ENST00000511911 260 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC011979.2-201ENST00000527568 352 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC034105.4-201ENST00000568304 277 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC006504.3-201ENST00000586818 523 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC008277.2-201ENST00000605196 797 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC104458.1-201ENST00000608243 463 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 TUG1_1.1-201ENST00000610654 145 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AL023881.1-201ENST00000621088 301 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC007546.2-201ENST00000623996 360 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC008785.1-201ENST00000624475 456 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AC244517.1-201ENST00000606030 2086 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.42□□□□□ -1.7
PCDHB1Q9Y5F3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 AP001273.1-201ENST00000624493 3152 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-1097P-201ENST00000363586 107 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RNU6-263P-201ENST00000363811 107 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RNY3P13-201ENST00000365542 102 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 RPL32P23-201ENST00000397237 405 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 CCDC58P2-201ENST00000417131 366 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 BEND7P1-201ENST00000422058 457 ntBASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHB1Q9Y5F3 OR4C10P-201ENST00000434991 931 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms