Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SKP160-201ENST00000363804 340 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 MIR105-2-201ENST00000385083 81 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 RNA5SP56-201ENST00000410277 118 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 CYCSP10-201ENST00000417973 294 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 ELOCP18-201ENST00000434209 337 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AC004866.2-201ENST00000438285 481 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AL133445.1-201ENST00000467051 452 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SL189P-201ENST00000468631 289 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 Y_RNA.687-201ENST00000516558 91 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SKP92-201ENST00000517266 244 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 IGKV2-19-201ENST00000518132 283 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AC144568.1-201ENST00000520139 137 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AP003733.2-201ENST00000529409 171 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 TXNP4-201ENST00000575018 310 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 MIR4505-201ENST00000582238 73 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 OR1M4P-201ENST00000589199 287 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AL390123.1-201ENST00000603216 237 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 SUMO2P15-201ENST00000604285 278 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AC064801.1-201ENST00000612025 407 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHB11Q9Y5F2 AC005183.1-201ENST00000603687 1979 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 SNORA74A-201ENST00000364089 198 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 Y_RNA.416-201ENST00000384014 113 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 MIR1178-201ENST00000408396 91 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 BX510359.3-201ENST00000422168 306 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AC016712.1-201ENST00000431088 378 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 RNU7-169P-201ENST00000459456 61 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 PPIAP21-201ENST00000464473 501 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SL466P-201ENST00000497546 295 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 RPS27AP13-201ENST00000498403 237 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 OR4H12P-201ENST00000556269 907 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SL652P-201ENST00000577769 300 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AC006363.1-201ENST00000603806 463 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 FO393422.1-201ENST00000603908 708 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AC009779.6-201ENST00000603972 165 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AL450472.3-201ENST00000615578 367 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 GTF2IP4-201ENST00000453092 2054 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 PHKBP1-201ENST00000450951 1951 ntBASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHB11Q9Y5F2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 Y_RNA.180-201ENST00000363867 113 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 SAR1AP2-201ENST00000392696 594 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 HMGB1P20-201ENST00000402555 677 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 MIR548H3-201ENST00000408771 118 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 RN7SKP17-201ENST00000411242 351 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 BX842559.1-201ENST00000419615 532 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 RPS15AP6-201ENST00000420703 385 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 FTLP19-201ENST00000433300 394 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 AC090774.1-201ENST00000435925 246 ntBASIC5.68□□□□□ -1.5
PCDHB11Q9Y5F2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms