Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 GLUD1P4-201ENST00000590914 418 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC015849.6-201ENST00000605454 474 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC055764.2-201ENST00000610089 670 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC096577.2-201ENST00000611455 153 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC245884.12-201ENST00000615364 59 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 AC010809.3-201ENST00000621310 641 ntBASIC1.87□□□□□ -2.11
AP4S1Q9Y587 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
AP4S1Q9Y587 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 RNU2-21P-201ENST00000410368 188 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AL356379.1-201ENST00000414105 126 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 MTND2P8-201ENST00000450555 1025 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC015908.1-201ENST00000478739 476 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 CCNHP1-201ENST00000513311 678 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 RNU4-29P-201ENST00000515943 174 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC083923.1-201ENST00000523708 376 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC008749.1-201ENST00000597650 306 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC024220.1-201ENST00000603675 484 ntBASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
AP4S1Q9Y587 AC007342.9-201ENST00000623877 1385 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 RNU1-52P-201ENST00000384190 164 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 SNORA46.1-201ENST00000391069 153 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 ATF1P1-201ENST00000406040 927 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 ZNF90P2-204ENST00000419323 1075 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 RPS15AP40-201ENST00000419621 391 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AL513175.1-201ENST00000431492 780 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AL358232.1-201ENST00000448030 501 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC008427.1-201ENST00000503102 655 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC006499.2-201ENST00000513470 337 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 IGKV3-31-201ENST00000523109 329 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 FAM92A1P1-201ENST00000528023 890 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 SNRPGP18-201ENST00000553000 214 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC234778.2-201ENST00000566241 354 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC007179.3-201ENST00000604976 235 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AL392112.1-201ENST00000605115 829 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC015726.3-201ENST00000624501 418 ntBASIC1.85□□□□□ -2.11
AP4S1Q9Y587 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
AP4S1Q9Y587 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC073346.2-201ENST00000624724 2058 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 RNA5SP139-201ENST00000364340 117 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 SNORA36C-201ENST00000384289 132 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 RPL23AP83-201ENST00000434984 473 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AL031663.1-201ENST00000437445 219 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AL136380.1-201ENST00000447970 162 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC010285.1-201ENST00000470580 392 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 RPS15AP34-201ENST00000487776 387 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC113155.1-201ENST00000511141 769 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 MTND2P26-201ENST00000528255 1029 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 HSPE1P3-201ENST00000559254 309 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.84□□□□□ -2.11
AP4S1Q9Y587 MIR1254-2-201ENST00000579553 63 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 AC090897.2-201ENST00000581715 130 ntBASIC1.84□□□□□ -2.11
AP4S1Q9Y587 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms