Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 SNORA56-201ENST00000383966 129 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RPL21P67-201ENST00000402896 478 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MIR548F4-201ENST00000408515 105 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RNA5SP296-201ENST00000410523 111 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RPS12P24-201ENST00000412619 387 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 GSTM3P2-201ENST00000412746 530 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 OR2AS1P-201ENST00000427827 319 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AURKAPS2-201ENST00000454983 333 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RPS29P22-201ENST00000472363 168 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RANP9-201ENST00000519957 271 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC011979.2-201ENST00000527568 352 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC068993.1-201ENST00000546724 589 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC004817.2-201ENST00000561794 651 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RN7SL802P-201ENST00000577858 299 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MIR4330-201ENST00000579077 105 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RN7SL52P-201ENST00000584271 284 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AL390240.1-201ENST00000612950 384 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RN7SL722P-201ENST00000617780 284 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 RN7SL565P-201ENST00000618246 284 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 STX3-208ENST00000641815 3236 ntBASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.11□□□□□ -1.43
CHMP3Q9Y3E7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 Y_RNA.112-201ENST00000363250 102 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RNU6-511P-201ENST00000363496 107 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RPL7AP61-201ENST00000443410 636 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AL031584.1-201ENST00000447169 754 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 ELOCP24-201ENST00000456370 334 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 SNRPFP3-201ENST00000457792 225 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 Y_RNA.653-201ENST00000459091 95 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RN7SL738P-201ENST00000470264 297 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 HMGB1P21-201ENST00000502313 581 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 MTCO2P24-201ENST00000515611 426 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RN7SKP276-201ENST00000516242 268 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RNA5SP392-201ENST00000516905 112 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 RNU6-1213P-201ENST00000517075 94 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AL049839.1-201ENST00000556151 657 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC011477.5-201ENST00000586571 259 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AF038458.1-201ENST00000588406 262 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 Z82243.1-201ENST00000609432 473 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 uc_338.18-201ENST00000615451 175 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AL022401.1-201ENST00000619498 108 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AP001005.3-201ENST00000622049 129 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 AC011155.2-201ENST00000623202 216 ntBASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHMP3Q9Y3E7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms