Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AC138393.1-203ENST00000327086 343 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RNA5SP52-201ENST00000362448 134 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RNU6-823P-201ENST00000391042 103 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AL080315.1-201ENST00000406055 466 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 HSPE1P8-201ENST00000406997 288 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AL354868.1-201ENST00000417077 482 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 CRIP1P1-201ENST00000427567 185 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AC009963.2-201ENST00000453431 138 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RNU7-187P-201ENST00000458985 68 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RN7SL72P-201ENST00000460697 269 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AC090602.1-201ENST00000469695 252 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RPS24P16-201ENST00000497294 392 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AC105384.2-201ENST00000508433 640 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 GMPSP1-201ENST00000514075 579 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 Y_RNA.668-201ENST00000516233 93 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RNU4-77P-201ENST00000516692 156 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 SNORA43.3-201ENST00000517240 103 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AC109446.1-201ENST00000566172 220 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 RPL23AP87-202ENST00000573039 466 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 LRRC37A5P-203ENST00000580181 585 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 AC005344.1-201ENST00000613391 459 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXD3Q9UJU5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 LINC01963-201ENST00000562038 3148 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 RNU6-238P-201ENST00000363313 106 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 RNU6-1059P-201ENST00000363752 98 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 RNU6-1303P-201ENST00000364841 107 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 DEFB109C-201ENST00000382575 264 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 DEFB109B-201ENST00000382656 264 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 Y_RNA.424-201ENST00000384063 103 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 SNORA51.8-201ENST00000384234 132 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC097374.1-203ENST00000400783 485 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC096921.1-201ENST00000411661 375 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 MRPL53P1-201ENST00000414323 319 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC119751.6-201ENST00000416712 186 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 BX510359.3-201ENST00000422168 306 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 EIF4EP1-201ENST00000422311 642 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 DAP3P1-201ENST00000441522 278 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 PCMTD1P1-201ENST00000455560 355 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 RPS26P39-201ENST00000469206 341 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 RN7SL188P-201ENST00000469842 285 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC010655.3-201ENST00000478818 450 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC074255.1-201ENST00000511259 501 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 RNU6-120P-201ENST00000516077 103 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 SNRPGP16-201ENST00000533275 226 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC084783.1-201ENST00000565846 910 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 MIR548AC-201ENST00000585049 88 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AL133481.2-203ENST00000607558 139 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 SDR42E1P1-201ENST00000611327 477 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AL021879.1-201ENST00000611756 288 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AL031601.2-202ENST00000622650 282 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 AC073869.8-201ENST00000641806 335 ntBASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
FOXD3Q9UJU5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 OR9K1P-202ENST00000641111 3217 ntBASIC5.12□□□□□ -1.59
FOXD3Q9UJU5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms