Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SCN11AQ9UI33 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.54□□□□□ -2
SCN11AQ9UI33 SNORA40.18-201ENST00000391200 128 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.54□□□□□ -2
SCN11AQ9UI33 RPL7P46-201ENST00000425129 740 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 CLIC4P1-201ENST00000453177 535 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 SNRPGP9-201ENST00000456025 225 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC007182.2-201ENST00000489251 402 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 OR52A4P-203ENST00000498233 1014 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 SNX5P1-201ENST00000505757 1041 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.54□□□□□ -2
SCN11AQ9UI33 AC025881.1-201ENST00000518851 512 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 MIR4255-201ENST00000579351 72 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 MIR4512-201ENST00000583257 77 ntBASIC2.54□□□□□ -2
SCN11AQ9UI33 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.54□□□□□ -2
SCN11AQ9UI33 AL118496.1-201ENST00000440201 1812 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SCN11AQ9UI33 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SCN11AQ9UI33 AL512283.1-201ENST00000606756 1384 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN11AQ9UI33 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
SCN11AQ9UI33 MIR583-201ENST00000384846 75 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 AC109583.1-201ENST00000432156 268 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.53□□□□□ -2
SCN11AQ9UI33 AC245517.4-201ENST00000448601 281 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 AC012181.1-201ENST00000479895 423 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.53□□□□□ -2
SCN11AQ9UI33 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.53□□□□□ -2
SCN11AQ9UI33 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.53□□□□□ -2
SCN11AQ9UI33 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.53□□□□□ -2
SCN11AQ9UI33 SNRPGP19-201ENST00000603826 189 ntBASIC2.53□□□□□ -2
SCN11AQ9UI33 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN11AQ9UI33 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN11AQ9UI33 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.53□□□□□ -2
SCN11AQ9UI33 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 RPL23AP7-203ENST00000449021 469 ntBASIC2.52□□□□□ -2.01
SCN11AQ9UI33 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 AC233279.1-201ENST00000455300 423 ntBASIC2.52□□□□□ -2.01
SCN11AQ9UI33 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.52□□□□□ -2.01
SCN11AQ9UI33 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN11AQ9UI33 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 RNY1P10-201ENST00000363268 113 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 U3.37-201ENST00000408528 213 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 RNU2-58P-201ENST00000516403 183 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 RPP40P2-201ENST00000603596 712 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 Y_RNA.783-201ENST00000613546 102 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 RNA5SP295-201ENST00000362655 121 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 AF274854.1-201ENST00000413236 615 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 NDUFB4P6-201ENST00000436819 366 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 TRIM60P18-201ENST00000441518 828 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 AL133393.1-201ENST00000603277 287 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 RPAP2P1-201ENST00000603626 1168 ntBASIC2.51□□□□□ -2.01
SCN11AQ9UI33 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SCN11AQ9UI33 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCN11AQ9UI33 ZNF720P1-201ENST00000562403 1939 ntBASIC2.5□□□□□ -2.01
SCN11AQ9UI33 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SCN11AQ9UI33 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
SCN11AQ9UI33 AC017007.3-201ENST00000479865 435 ntBASIC2.5□□□□□ -2.01
SCN11AQ9UI33 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN11AQ9UI33 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN11AQ9UI33 AL359821.1-201ENST00000605519 182 ntBASIC2.5□□□□□ -2.01
SCN11AQ9UI33 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN11AQ9UI33 AL109809.4-201ENST00000603520 2185 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 SNORA25.9-201ENST00000365087 128 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 RSL24D1P2-201ENST00000445584 366 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 SNORD108-201ENST00000459332 71 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 RPS26P21-201ENST00000475397 348 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AC104986.1-201ENST00000517978 436 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AP003385.6-201ENST00000531603 374 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AP004242.1-201ENST00000533701 349 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 DUXAP3-201ENST00000603616 594 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AP000787.2-201ENST00000604432 568 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AL139276.1-201ENST00000311910 1001 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 RNU4-62P-201ENST00000410125 130 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 RNU6-1140P-201ENST00000410517 106 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 FNDC3CP-201ENST00000420795 1155 ntBASIC2.49□□□□□ -2.01
SCN11AQ9UI33 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN11AQ9UI33 MTAPP1-201ENST00000489154 819 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms