Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 Y_RNA.554-201ENST00000384672 102 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 RNA5SP36-201ENST00000410197 133 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 RN7SKP266-201ENST00000410232 287 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 HMGB3P23-201ENST00000414981 585 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 RPS29P17-201ENST00000430795 166 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 RPL23AP46-201ENST00000438548 490 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 GDI2P2-201ENST00000445131 608 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 VN1R34P-201ENST00000447387 883 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AL359385.1-201ENST00000456509 365 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 RPL36AP13-201ENST00000457490 317 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 RPS3AP17-201ENST00000472594 777 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 RN7SL481P-201ENST00000477764 299 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC093677.1-201ENST00000514414 678 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 RNA5SP49-201ENST00000516450 115 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 RNA5SP143-201ENST00000516936 115 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 OR5AP1P-201ENST00000529730 940 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 TRAV8-5-201ENST00000537369 341 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 SETP7-201ENST00000552169 453 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 MIR4697-201ENST00000582977 78 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 VN1R79P-201ENST00000593540 513 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 SNRPGP15-201ENST00000600149 222 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AP000860.1-201ENST00000605250 559 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AC103710.1-201ENST00000610003 901 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP25Q9UHP3 MIR378J-201ENST00000611988 109 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AL773545.4-201ENST00000637262 310 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 AL513478.4-201ENST00000641636 310 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 AL158163.1-201ENST00000603915 1649 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 MARK2P15-201ENST00000432204 2186 ntBASIC4.71□□□□□ -1.66
USP25Q9UHP3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.71□□□□□ -1.66
USP25Q9UHP3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 RNU6-777P-201ENST00000364265 104 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 RNU6-398P-201ENST00000384143 109 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 RPS7P15-201ENST00000415804 584 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 BX890604.2-201ENST00000427883 474 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 MTND4LP10-201ENST00000435146 291 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 MTCYBP45-201ENST00000435243 565 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 PGBD4P3-201ENST00000440731 581 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 SNRPGP5-201ENST00000456003 220 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 RPL23AP24-201ENST00000458203 385 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 snoU13.8-201ENST00000458890 104 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 FTH1P2-201ENST00000466086 412 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC106872.3-201ENST00000495104 446 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 FCF1P3-201ENST00000496394 590 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 RNU6-528P-201ENST00000516926 100 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 MTCO2P4-201ENST00000517968 247 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 AP004371.1-201ENST00000525240 214 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC013828.2-201ENST00000532487 235 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP25Q9UHP3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC068831.4-201ENST00000556118 109 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.7□□□□□ -1.66
USP25Q9UHP3 MIR4307-201ENST00000582802 84 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 MIR4715-201ENST00000584117 79 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC091135.1-201ENST00000585943 307 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 BNIP3P23-201ENST00000599655 511 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC112191.3-201ENST00000604371 277 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 AC004853.1-201ENST00000604902 698 ntBASIC4.7□□□□□ -1.66
USP25Q9UHP3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms