Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AP001429.1-201ENST00000602568 530 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AP000811.1-201ENST00000603803 651 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 RNU6-88P-201ENST00000606801 100 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AP003485.2-201ENST00000623636 610 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AC009039.2-201ENST00000624524 529 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AC007671.2-201ENST00000637344 619 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 OR5BE1P-202ENST00000641168 1176 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 AC073073.2-201ENST00000609827 2578 ntBASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UBQLN2Q9UHD9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 RNU6-723P-201ENST00000383973 107 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 PPIAP31-201ENST00000405422 495 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MIR320C1-201ENST00000408566 88 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 RNA5SP107-201ENST00000411358 122 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 Z97055.1-201ENST00000419730 712 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL035407.1-201ENST00000429211 571 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MTND1P26-201ENST00000440488 538 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MTCYBP3-201ENST00000445588 1137 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL590664.1-201ENST00000448065 339 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 ART2BP-201ENST00000453501 499 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MTCO2P6-201ENST00000463134 685 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL049714.1-201ENST00000466686 347 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC104563.1-201ENST00000476147 376 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC093824.1-201ENST00000508796 343 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC024589.1-201ENST00000512207 263 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MTND5P4-201ENST00000514978 288 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC026801.2-201ENST00000515352 425 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL353997.4-201ENST00000586196 166 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC008507.1-201ENST00000587506 734 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC020914.6-201ENST00000594327 272 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL158211.4-201ENST00000606988 584 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AP000254.1-201ENST00000609934 520 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AL445567.2-201ENST00000618935 498 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MIR6130-201ENST00000619419 109 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 MIR3653-201ENST00000625572 110 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 AC007496.3-201ENST00000624987 3443 ntBASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.17□□□□□ -1.9
UBQLN2Q9UHD9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RNU6-462P-201ENST00000362659 105 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RNU6-97P-201ENST00000363387 104 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RNA5SP88-201ENST00000365560 109 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC068538.1-201ENST00000376856 336 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 Y_RNA.548-201ENST00000384656 105 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL354719.1-201ENST00000406535 843 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RNA5SP38-201ENST00000410750 119 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL358472.1-201ENST00000431295 329 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AC091390.1-201ENST00000433904 331 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 RPL23AP22-201ENST00000437556 453 ntBASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.16□□□□□ -1.9
UBQLN2Q9UHD9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms