Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL137100.2-201ENST00000555786 315 ntBASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 AL049839.1-201ENST00000556151 657 ntBASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 AC004584.2-201ENST00000570407 410 ntBASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 ZNF285B-201ENST00000561698 1767 ntBASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
LIMD1Q9UGP4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 MAPK10-338ENST00000641647 3362 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 SRRM1P3-201ENST00000426911 2678 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.64-201ENST00000362845 102 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RNU1-146P-201ENST00000364015 165 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 SNORA70E-201ENST00000384492 135 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.534-201ENST00000384599 112 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 MIR578-201ENST00000384828 96 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 MIR223-201ENST00000385204 110 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 MIR628-201ENST00000385229 95 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AL645927.1-201ENST00000396783 406 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RNU6-325P-201ENST00000411132 105 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC063979.1-201ENST00000415539 377 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 SSXP9-201ENST00000417503 292 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC007098.1-201ENST00000420122 367 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AL139148.1-201ENST00000427122 680 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RPS17P8-201ENST00000434525 335 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RPS17P15-201ENST00000475609 349 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RPS17P5-201ENST00000498293 408 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC025465.3-201ENST00000510570 311 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 MTND1P19-201ENST00000511780 315 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RNU6-789P-201ENST00000517105 102 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC007494.1-201ENST00000562293 760 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC009852.2-201ENST00000567898 485 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RPSAP73-201ENST00000614820 330 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 SNORD39.4-201ENST00000620099 78 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 MIR6837-201ENST00000620884 64 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 SDR42E1P4-201ENST00000620894 481 ntBASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LIMD1Q9UGP4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 SNX18P3-202ENST00000565670 1750 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 RNA5SP52-201ENST00000362448 134 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.324-201ENST00000365165 102 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 RNU6-76P-201ENST00000384060 104 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.785-201ENST00000384290 109 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.477-201ENST00000384352 108 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AC009804.1-201ENST00000400949 179 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AL513475.1-201ENST00000406602 315 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 MIR548H3-201ENST00000408771 118 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AL590399.6-201ENST00000446396 307 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 OR2AQ1P-201ENST00000451972 200 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 CEACAMP6-201ENST00000452007 574 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AC100832.1-201ENST00000471945 383 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 TRBVB-201ENST00000477100 408 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 FO393415.2-201ENST00000480085 343 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 RPS4XP1-201ENST00000482189 787 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 AC090517.1-201ENST00000569307 266 ntBASIC6.09□□□□□ -1.43
LIMD1Q9UGP4 MIR3189-201ENST00000578735 73 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms