Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC103881.1-201ENST00000603476 538 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 DPRXP5-201ENST00000604662 539 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 VIS1.1-201ENST00000610517 203 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC090116.1-201ENST00000615679 446 ntBASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP2Q9UDT6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 MIR22-201ENST00000362190 85 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 RNU1-140P-201ENST00000365040 165 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AF228730.1-201ENST00000397972 663 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 RNU4-78P-201ENST00000410940 126 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 Z93242.1-201ENST00000427102 353 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC244505.4-201ENST00000434905 287 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 SSXP5-201ENST00000443473 287 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC140076.1-201ENST00000449897 361 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 MRPL42P4-201ENST00000453267 443 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC010285.1-201ENST00000470580 392 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 HMGN2P13-201ENST00000476476 274 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AL049873.1-201ENST00000480540 376 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC108860.1-201ENST00000484521 383 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC098862.1-201ENST00000504991 413 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC096571.1-202ENST00000506634 735 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC104417.1-201ENST00000523974 751 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 EIF4BP1-201ENST00000554881 351 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC104072.1-201ENST00000568817 668 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC006116.7-201ENST00000590141 756 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 GAS5-AS1-201ENST00000602767 694 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AP003973.1-201ENST00000604639 691 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AL158050.2-201ENST00000605336 568 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AL390240.1-201ENST00000612950 384 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC140725.3-201ENST00000616193 880 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AL138955.1-201ENST00000622881 1040 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC109454.4-201ENST00000623411 649 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AP003476.1-201ENST00000623984 516 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 AC026634.1-201ENST00000634369 198 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 MTND5P19-201ENST00000424872 1794 ntBASIC3.6□□□□□ -1.83
CLIP2Q9UDT6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 HMGB1P5-201ENST00000255320 642 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 MTND4LP20-201ENST00000402379 270 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC069282.1-201ENST00000411911 526 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 RPS7P9-201ENST00000414704 586 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 TRIM60P18-201ENST00000441518 828 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC008837.1-201ENST00000511513 412 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC044913.1-201ENST00000557200 430 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 H3F3AP1-201ENST00000559984 334 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AL049838.1-201ENST00000563647 981 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC091057.3-201ENST00000602684 733 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 BNIP3P11-201ENST00000603878 563 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC112220.2-201ENST00000605513 533 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC097504.2-201ENST00000608088 454 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC018645.2-201ENST00000609151 472 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AL512427.1-201ENST00000618593 349 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC006386.2-201ENST00000624491 75 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 AC012005.1-201ENST00000624575 75 ntBASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLIP2Q9UDT6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLIP2Q9UDT6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.59□□□□□ -1.84
CLIP2Q9UDT6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP2Q9UDT6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms