Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORD84-203ENST00000584275 78 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AL158163.2-201ENST00000619110 700 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AL121895.2-201ENST00000619558 447 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC120349.2-201ENST00000625002 298 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC091925.2-201ENST00000625059 256 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 LINC02211-204ENST00000642024 1070 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AL049780.3-201ENST00000624612 1583 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 SNRPEP3-201ENST00000338402 276 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 RPL7P25-201ENST00000404151 721 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 RN7SKP220-201ENST00000410611 288 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 RNU2-15P-201ENST00000410692 191 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC099677.1-201ENST00000420575 175 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 FTH1P1-201ENST00000437933 532 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 ISCA1P2-201ENST00000438679 421 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 RPL39P6-201ENST00000448289 150 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MTND2P19-201ENST00000449129 1012 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 HMGB1P15-201ENST00000453854 435 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 USP9YP34-201ENST00000453983 808 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AL445669.2-201ENST00000454425 421 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 snoU13.4-201ENST00000458916 104 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC104164.3-201ENST00000467363 1258 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC113420.1-201ENST00000507903 571 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC006390.1-201ENST00000508068 283 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MTCO2P32-201ENST00000514865 403 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 RN7SKP31-201ENST00000516354 278 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 RN7SKP289-201ENST00000517244 295 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC126177.3-201ENST00000551839 688 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MTCYBP23-201ENST00000558717 1102 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC087481.2-201ENST00000565492 330 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MIR4509-3-201ENST00000578671 94 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MIR4509-2-201ENST00000583920 94 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 BNIP3P11-201ENST00000603878 563 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC010738.1-201ENST00000604970 987 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 CYCSP41-201ENST00000616920 296 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 MIR4509-1-201ENST00000618224 94 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC022509.4-201ENST00000621404 572 ntBASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CLCF1Q9UBD9 AC109315.1-201ENST00000584143 1347 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 RNU1-75P-201ENST00000347264 129 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 SNORD51-201ENST00000384320 80 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 Y_RNA.472-201ENST00000384322 102 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 SNORA44-201ENST00000384584 132 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 SNORD67-201ENST00000390833 111 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 SNORA48.8-201ENST00000391324 134 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 RNA5SP107-201ENST00000411358 122 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AL662791.1-201ENST00000441992 928 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AL031313.1-201ENST00000448435 256 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 SLC31A1P1-201ENST00000451221 567 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 PTGES3P5-201ENST00000455109 434 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC080014.1-201ENST00000496877 1201 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 TXNP6-201ENST00000510190 310 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 OR10V3P-201ENST00000525712 725 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 TRAV37-201ENST00000553906 342 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 HIGD1AP17-201ENST00000554576 276 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC106782.4-201ENST00000568264 210 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC245036.5-201ENST00000596330 847 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC093732.2-201ENST00000607950 274 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 MTND5P27-201ENST00000428871 1720 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 AL672296.1-201ENST00000427780 2158 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.75□□□□□ -1.97
CLCF1Q9UBD9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.74□□□□□ -1.97
CLCF1Q9UBD9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms