Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC110994.2-201ENST00000635481 492 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 MTND5P6-201ENST00000422338 1798 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 RNU6-50P-201ENST00000362356 103 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 RNU6-98P-201ENST00000384173 107 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 HSPE1P1-201ENST00000421494 318 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 UBE2V2P3-201ENST00000433562 437 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 HMGB1P12-201ENST00000438594 598 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 TPTE2P6-202ENST00000445572 1007 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 RAD1P2-201ENST00000446414 663 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC104058.1-201ENST00000448028 297 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 RPS29P21-201ENST00000496272 170 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC008549.1-201ENST00000512900 643 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 MTCO3P24-201ENST00000572729 782 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 MIR4524B-201ENST00000581569 115 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AP001029.3-201ENST00000588063 596 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 YWHAQP7-201ENST00000603536 658 ntBASIC2.17□□□□□ -2.06
CCDC88CQ9P219 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC88CQ9P219 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 ZNF271P-202ENST00000465539 1970 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 RNA5SP391-201ENST00000363456 119 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 RNU1-109P-201ENST00000383960 147 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 AL590623.1-201ENST00000427864 105 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 Z98742.2-201ENST00000431564 187 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 AC092685.1-201ENST00000447960 1243 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 BX276092.4-201ENST00000452056 248 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 GAPDHP39-201ENST00000481866 979 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 RN7SKP244-201ENST00000516513 307 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 AC090616.5-202ENST00000582111 297 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 CR589904.2-201ENST00000612533 440 ntBASIC2.16□□□□□ -2.06
CCDC88CQ9P219 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC88CQ9P219 RFESDP1-201ENST00000422350 461 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC241520.1-201ENST00000422654 1099 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 USP9YP8-201ENST00000441913 500 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AL513124.1-201ENST00000450410 614 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 LINC00888-204ENST00000487386 421 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC106872.3-201ENST00000495104 446 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC234781.5-201ENST00000508429 271 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC008494.2-201ENST00000514544 370 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AP001646.1-201ENST00000527936 915 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC027104.1-201ENST00000563702 681 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AL009028.1-201ENST00000604895 802 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC011374.2-201ENST00000607135 526 ntBASIC2.15□□□□□ -2.06
CCDC88CQ9P219 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC88CQ9P219 MTND5P28-201ENST00000438005 1594 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 RNU4-23P-201ENST00000362839 140 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 EI24P1-201ENST00000416584 867 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 HIGD1AP11-201ENST00000438361 280 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 MTCYBP37-201ENST00000510642 1133 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 RNU1-61P-201ENST00000516107 151 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 HSPE1P20-201ENST00000538133 289 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 SETP2-201ENST00000553886 926 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 AL160237.3-201ENST00000604114 1013 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 AC104763.2-201ENST00000604179 382 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 HMGN2P28-201ENST00000606102 262 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 AC092608.2-201ENST00000624427 218 ntBASIC2.15□□□□□ -2.07
CCDC88CQ9P219 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC88CQ9P219 RNU6-629P-201ENST00000384061 103 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 RNU1-138P-201ENST00000384093 164 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC88CQ9P219 ATF1P1-201ENST00000406040 927 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 GSTA9P-201ENST00000406231 611 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 MIR1261-201ENST00000408659 82 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 RNA5SP508-201ENST00000411327 119 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 SSXP9-201ENST00000417503 292 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 FNDC3CP-201ENST00000420795 1155 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 ATP5F1P1-201ENST00000433775 569 ntBASIC2.14□□□□□ -2.07
CCDC88CQ9P219 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms