Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC013828.2-201ENST00000532487 235 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 CYCSP30-201ENST00000546447 172 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC091489.2-201ENST00000566263 604 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 ZNF415P1-201ENST00000582279 1166 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC087683.1-201ENST00000591187 441 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 BNIP3P23-201ENST00000599655 511 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 VN1R85P-201ENST00000601587 426 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC079089.3-201ENST00000603094 673 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC073648.5-201ENST00000603502 305 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC015871.2-201ENST00000603605 948 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC006077.1-201ENST00000604746 343 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC113194.1-201ENST00000606037 500 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 AC097468.3-201ENST00000607956 456 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 PRO1804-201ENST00000623780 2050 ntBASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMARCAL1Q9NZC9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 FGF7P2-201ENST00000332473 296 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RNA5SP479-201ENST00000364858 117 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-952P-201ENST00000391164 108 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RN7SKP285-201ENST00000410137 318 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RNU2-16P-201ENST00000410712 136 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AF274854.1-201ENST00000413236 615 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RPS7P13-201ENST00000413955 498 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 BX679664.1-201ENST00000434429 253 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 TPT1P7-201ENST00000458300 517 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AP001086.1-201ENST00000494882 321 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AF131216.2-201ENST00000512316 564 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RNA5SP164-201ENST00000516533 110 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC025881.1-201ENST00000518851 512 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC007991.1-201ENST00000522680 631 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 PTP4A1P6-201ENST00000531034 478 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 HSPE1P3-201ENST00000559254 309 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC087499.8-201ENST00000578406 226 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 RN7SL703P-201ENST00000578485 302 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC006270.2-201ENST00000578523 652 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC244505.7-201ENST00000599675 272 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AL021997.1-201ENST00000605757 193 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AC105429.2-201ENST00000610567 517 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AL391261.4-201ENST00000616012 481 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AP000553.6-201ENST00000641242 118 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 AL022578.1-201ENST00000439330 1433 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 MTND5P29-201ENST00000458676 1807 ntBASIC3.77□□□□□ -1.81
SMARCAL1Q9NZC9 MTND5P28-201ENST00000438005 1594 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 RNU4-91P-201ENST00000364778 135 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 MIR1193-201ENST00000408109 78 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-648P-201ENST00000410190 107 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC007899.1-201ENST00000412776 775 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 NUP35P2-201ENST00000416748 943 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 RPS27AP14-201ENST00000422868 454 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AL138799.3-201ENST00000438968 350 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AL592447.1-201ENST00000447592 540 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 MTCO1P27-201ENST00000448269 226 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC104073.1-201ENST00000451988 151 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms