Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR5692C1-201ENST00000585309 91 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 BNIP3P16-201ENST00000589779 534 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AL451044.1-201ENST00000604867 238 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC018889.1-201ENST00000605372 397 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC010378.1-201ENST00000619270 362 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSU72Q9NP77 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSU72Q9NP77 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSU72Q9NP77 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSU72Q9NP77 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC009951.1-201ENST00000623674 2614 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 RNU6-562P-201ENST00000362731 107 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 SMIM11P1-201ENST00000369586 178 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 SNORD51-201ENST00000384320 80 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 RNU6-1026P-201ENST00000384465 108 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 SNORD3H-201ENST00000384486 214 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 Y_RNA.574-201ENST00000384766 95 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 SNORA16.2-201ENST00000390991 127 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSU72Q9NP77 RPL31P2-201ENST00000413849 377 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC099336.2-201ENST00000422457 254 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 RPL7P37-201ENST00000425095 738 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 SNAP23P1-201ENST00000433229 246 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 EEF1B2P6-201ENST00000445713 673 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 GAPDHP27-201ENST00000447427 1020 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 HMGB3P21-201ENST00000452483 547 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC099560.2-201ENST00000457554 255 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 U8.20-201ENST00000459445 131 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 RPS17P2-201ENST00000461663 408 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC108751.2-201ENST00000469993 231 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC128713.1-201ENST00000471495 306 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 UBA52P7-201ENST00000486088 380 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AF213884.1-201ENST00000488102 463 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC116337.1-201ENST00000509680 687 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC021146.3-201ENST00000511911 260 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 TBCAP3-201ENST00000512475 312 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 RNU6-1069P-201ENST00000516612 133 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC015720.2-201ENST00000567709 334 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC113195.1-201ENST00000579952 141 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC009229.3-201ENST00000608056 282 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC011890.2-201ENST00000613393 294 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 MIR6128-201ENST00000615528 109 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC074140.1-201ENST00000621617 208 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC074101.1-201ENST00000637861 241 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSU72Q9NP77 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC126323.6-202ENST00000568092 3511 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSU72Q9NP77 Z95327.2-201ENST00000414579 1873 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 AC008758.3-201ENST00000507003 1829 ntBASIC5.07□□□□□ -1.6
SSU72Q9NP77 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSU72Q9NP77 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSU72Q9NP77 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 EXOC5P1-201ENST00000510543 1969 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 CDC27P3-201ENST00000635418 1910 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RNA5SP335-201ENST00000363817 110 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RN7SKP113-201ENST00000363891 295 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RN7SKP275-201ENST00000364626 301 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 Y_RNA.476-201ENST00000384347 108 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RNU6-754P-201ENST00000391166 107 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 SNORA75.6-201ENST00000391318 127 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RNU2-47P-201ENST00000410649 186 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RNU2-18P-201ENST00000411224 162 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 RNU6-516P-201ENST00000411381 104 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL590632.1-201ENST00000424289 371 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL450023.3-201ENST00000440592 271 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AL583843.1-201ENST00000456070 346 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.06□□□□□ -1.6
SSU72Q9NP77 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC104339.1-201ENST00000465478 348 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC103987.1-201ENST00000473394 348 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AP002812.1-201ENST00000495378 474 ntBASIC5.06□□□□□ -1.6
SSU72Q9NP77 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms