Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC093227.2-201ENST00000589357 285 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC012065.4-201ENST00000602445 679 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 RNA5SP108-201ENST00000605921 117 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC122108.2-201ENST00000611946 526 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AL732618.1-201ENST00000623251 301 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC006065.5-201ENST00000623427 349 ntBASIC3.76□□□□□ -1.81
PCDH9Q9HC56 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.76□□□□□ -1.81
PCDH9Q9HC56 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 ZNF33CP-201ENST00000432492 2030 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 RNU5F-6P-201ENST00000362979 116 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 Y_RNA.359-201ENST00000365498 102 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AL590704.1-201ENST00000402856 794 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 RNU2-37P-201ENST00000410695 177 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 CYCSP19-201ENST00000411715 316 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 MTCO3P41-201ENST00000414801 328 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AL389915.1-201ENST00000422463 466 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AL512649.1-201ENST00000428997 581 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 PSMA2P3-201ENST00000429685 675 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 HSPE1P28-201ENST00000443139 211 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 USP9YP29-201ENST00000445112 563 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 ARPC3P5-201ENST00000448802 534 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 USP9YP34-201ENST00000453983 808 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 RPL31P50-201ENST00000471002 296 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 POU5F1P7-201ENST00000508759 541 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC093809.1-201ENST00000509155 340 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 RNU6-579P-201ENST00000516879 102 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AP006245.1-201ENST00000522549 120 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC024224.1-201ENST00000538284 609 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 OR6C7P-201ENST00000547875 934 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 OR4G1P-201ENST00000588632 938 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 PRELID3BP8-201ENST00000604148 295 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 AC010678.1-201ENST00000614118 713 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 U7.8-201ENST00000619968 63 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 USP8P1-201ENST00000494673 3183 ntBASIC3.75□□□□□ -1.81
PCDH9Q9HC56 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PCDH9Q9HC56 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 RPL23AP57-201ENST00000332361 466 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 U8.11-201ENST00000384699 133 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 U8.12-201ENST00000384701 133 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 U8.14-201ENST00000390843 143 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 RNU6-328P-201ENST00000390887 106 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AL136116.1-201ENST00000403591 381 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 RN7SKP202-201ENST00000410439 330 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 RPL17P36-201ENST00000420302 549 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 RPS27AP14-201ENST00000422868 454 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC127537.2-201ENST00000439258 465 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AC002381.1-201ENST00000447049 280 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 HMGN2P21-201ENST00000447764 270 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 ST13P20-201ENST00000447996 1065 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 CFTRP1-201ENST00000456646 183 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 U8.18-201ENST00000459285 133 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 SNRPGP3-201ENST00000469405 227 ntBASIC3.74□□□□□ -1.81
PCDH9Q9HC56 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms