Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
DDX47Q9H0S4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 RNU6-173P-201ENST00000364215 104 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MIR135A2-201ENST00000384854 100 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 ERHP2-201ENST00000402323 299 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AL356131.1-201ENST00000405826 414 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 HSFY4P-201ENST00000415994 1181 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 USP9YP11-201ENST00000427537 717 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MTCYBP45-201ENST00000435243 565 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 HMGN2P20-201ENST00000437531 273 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MTCYBP34-201ENST00000439552 670 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AL031313.1-201ENST00000448435 256 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MTCO3P11-201ENST00000455103 774 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC021678.1-201ENST00000505195 936 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC119751.4-201ENST00000507498 357 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 XKRY-201ENST00000510392 1100 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MIR4506-201ENST00000584693 77 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 VN1R78P-201ENST00000597393 564 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MTND3P19-201ENST00000603825 345 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC004853.1-201ENST00000604902 698 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC012443.1-201ENST00000605605 231 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC016877.3-201ENST00000606778 504 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 uc_338.25-201ENST00000613756 156 ntBASIC3.3□□□□□ -1.88
DDX47Q9H0S4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
DDX47Q9H0S4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AL592310.1-201ENST00000414330 671 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 HSPD1P21-201ENST00000436541 245 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 MTND4P6-201ENST00000438297 472 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 RAC1P7-201ENST00000445367 377 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 RPL21P12-201ENST00000559810 515 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 MIR4509-3-201ENST00000578671 94 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 OR4K8P-201ENST00000578842 1048 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 MIR4509-2-201ENST00000583920 94 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 MIR4509-1-201ENST00000618224 94 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 MTND5P19-201ENST00000424872 1794 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AL355596.1-201ENST00000565399 3996 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 TAB3P1-202ENST00000452645 1634 ntBASIC3.29□□□□□ -1.88
DDX47Q9H0S4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DDX47Q9H0S4 AL356473.1-201ENST00000406203 1408 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AC118273.1-201ENST00000525324 3006 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 RPL23AP57-201ENST00000332361 466 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 HMGN1P24-201ENST00000412282 298 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 BEND7P1-201ENST00000422058 457 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 RPL17P49-201ENST00000443728 411 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AC093677.1-201ENST00000514414 678 ntBASIC3.28□□□□□ -1.88
DDX47Q9H0S4 AC026403.1-201ENST00000518938 295 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms