Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 Y_RNA.608-201ENST00000410647 95 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AL663109.1-201ENST00000411498 844 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 MTND1P21-201ENST00000412991 285 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 BEND7P1-201ENST00000422058 457 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC092832.1-201ENST00000422934 400 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AL356583.2-201ENST00000426536 280 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 THAP5P1-201ENST00000439089 262 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC092641.1-201ENST00000440229 772 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 MTCO1P19-201ENST00000443487 500 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AP000936.2-201ENST00000447151 681 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AL033528.1-201ENST00000453780 140 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC234775.1-201ENST00000454247 670 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC006517.1-201ENST00000480485 328 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 HMGN1P11-201ENST00000508668 303 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC023141.12-201ENST00000512399 199 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC090281.1-201ENST00000523019 276 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AP004371.1-201ENST00000525240 214 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 MIR3682-201ENST00000581338 84 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC004223.2-201ENST00000590309 544 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 HMGN2P28-201ENST00000606102 262 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 OR10AB1P-201ENST00000609613 938 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC009268.2-201ENST00000621925 457 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 AC004925.1-201ENST00000624256 2706 ntBASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTFDC1Q9BY42 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 RNA5SP502-201ENST00000362694 119 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 RNA5SP51-201ENST00000364750 119 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 RNU6-1181P-201ENST00000384191 106 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 RNU6-1042P-201ENST00000384204 107 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 Y_RNA.559-201ENST00000384686 107 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 SNORA3C-201ENST00000408792 125 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC092447.6-201ENST00000414578 210 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 USP9YP13-201ENST00000417797 480 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 TPTE2P5-203ENST00000458118 728 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 SNORD42A-201ENST00000459584 64 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 RPS26P28-201ENST00000470806 348 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL358832.1-201ENST00000497800 389 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC109464.2-201ENST00000510242 943 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 SCARNA13-201ENST00000516672 275 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 MYL12AP1-201ENST00000518490 515 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC034268.2-201ENST00000571784 482 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 MIR548AB-201ENST00000584917 84 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AL160281.1-201ENST00000605307 311 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 AC010678.1-201ENST00000614118 713 ntBASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RTFDC1Q9BY42 MTCO1P12-201ENST00000414273 1543 ntBASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 RNU6-1078P-201ENST00000364522 103 ntBASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 RNVU1-14-201ENST00000384770 164 ntBASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 RNU2-8P-201ENST00000410727 190 ntBASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 RPL7AP73-201ENST00000413490 353 ntBASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 CDK8P2-201ENST00000415020 547 ntBASIC4.72□□□□□ -1.65
RTFDC1Q9BY42 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms