Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HDHD3Q9BSH5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HDHD3Q9BSH5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.59□□□□□ -2
HDHD3Q9BSH5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HDHD3Q9BSH5 AL672296.1-201ENST00000427780 2158 ntBASIC2.59□□□□□ -2
HDHD3Q9BSH5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC007256.1-201ENST00000392253 2765 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 SNORD113-6-201ENST00000363345 75 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 Y_RNA.311-201ENST00000365068 96 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 RNU1-64P-201ENST00000365443 163 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 Y_RNA.465-201ENST00000384293 102 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 RSL24D1P4-201ENST00000400938 484 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AL445189.1-201ENST00000405722 338 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 RPL36AP36-201ENST00000418616 301 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 MTCO2P17-201ENST00000424336 677 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AL590233.1-201ENST00000430017 456 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 RPL23AP74-201ENST00000437246 471 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 PTENP1-201ENST00000447117 1215 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 MTND2P19-201ENST00000449129 1012 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC005297.2-201ENST00000450430 606 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 ELOCP23-201ENST00000452014 332 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AP001992.1-205ENST00000462248 379 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 RPS4XP10-201ENST00000465034 731 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AP004217.1-201ENST00000480579 346 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC096751.1-202ENST00000502691 1067 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC116353.3-201ENST00000511215 249 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 RN7SKP43-201ENST00000516173 320 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDHD3Q9BSH5 DEFB131D-201ENST00000526803 184 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC011611.1-201ENST00000552179 197 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AL121603.1-201ENST00000553815 142 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 MTND4P33-201ENST00000556706 766 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AL159169.3-201ENST00000608871 561 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC243773.3-201ENST00000613270 256 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC018755.4-201ENST00000619715 454 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AC116618.1-201ENST00000634617 774 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.58□□□□□ -2
HDHD3Q9BSH5 OR4G11P-202ENST00000642116 1414 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HDHD3Q9BSH5 AP001350.1-201ENST00000601906 1524 ntBASIC2.58□□□□□ -2
HDHD3Q9BSH5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HDHD3Q9BSH5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 RNA5SP295-201ENST00000362655 121 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 RNU4-28P-201ENST00000364739 141 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 RNU6-878P-201ENST00000384578 110 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 Y_RNA.548-201ENST00000384656 105 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 TPMTP2-201ENST00000414372 726 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 RPS7P15-201ENST00000415804 584 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 RAD23BP2-201ENST00000416003 1207 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 TIMM9P2-201ENST00000419324 266 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 SDCBPP3-201ENST00000419629 891 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC012498.1-201ENST00000424037 437 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 TRIAP1P1-201ENST00000427062 225 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AL353705.1-201ENST00000433468 480 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 RPL21P112-201ENST00000434403 463 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC005019.1-201ENST00000436455 431 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AL353691.1-201ENST00000451332 387 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 SUMO2P2-201ENST00000456482 255 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 RNU7-136P-201ENST00000458819 69 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC108729.1-201ENST00000487812 947 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 RN7SL633P-201ENST00000488974 297 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC114981.1-201ENST00000503897 678 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC026412.2-201ENST00000512270 1075 ntBASIC2.57□□□□□ -2
HDHD3Q9BSH5 AC010265.1-201ENST00000513509 211 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms