Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 RPS4XP22-201ENST00000480755 780 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC105914.1-201ENST00000511798 226 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 PDCL2P2-201ENST00000533651 189 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 OR6C7P-201ENST00000547875 934 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL391001.1-201ENST00000602747 715 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL133507.1-201ENST00000605269 557 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC008121.2-201ENST00000614647 523 ntBASIC3.98□□□□□ -1.77
SDF4Q9BRK5 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.98□□□□□ -1.77
SDF4Q9BRK5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 RIOK3P1-201ENST00000418778 1528 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AP000567.1-201ENST00000406413 156 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 RNU4-65P-201ENST00000410473 140 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC004866.2-201ENST00000438285 481 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 ANKRD26P4-201ENST00000455755 950 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 RPL23AP31-201ENST00000456160 467 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 snoU13.22-201ENST00000459428 104 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 MEMO1P3-201ENST00000459811 302 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC025518.1-201ENST00000479856 347 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 TXNP6-201ENST00000510190 310 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 RNA5SP216-201ENST00000516111 123 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC007458.1-201ENST00000542812 373 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC009097.3-201ENST00000563557 1018 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AP001029.3-201ENST00000588063 596 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC234772.3-201ENST00000602277 528 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 BDH2P1-201ENST00000602288 736 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 BBIP1P1-201ENST00000602999 279 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC006254.3-201ENST00000603353 884 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 TUG1_1.1-201ENST00000610654 145 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AL355365.1-201ENST00000616480 294 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 MIR7975-201ENST00000619350 68 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 AC110801.1-201ENST00000623590 212 ntBASIC3.97□□□□□ -1.77
SDF4Q9BRK5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
SDF4Q9BRK5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
SDF4Q9BRK5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 FRG1CP-201ENST00000358464 769 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 RNU6-931P-201ENST00000363850 107 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 RNU6-173P-201ENST00000364215 104 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 SNORA4.1-201ENST00000364263 144 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 RNU6-359P-201ENST00000365466 108 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AP002088.1-201ENST00000382740 395 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 MIR135A2-201ENST00000384854 100 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 MIR490-201ENST00000384865 128 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 RNU6-882P-201ENST00000391025 103 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 RN7SKP53-201ENST00000411337 315 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 XKRYP1-201ENST00000423438 492 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 XKRYP2-201ENST00000432915 492 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AL590103.1-201ENST00000434488 307 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AL121871.1-201ENST00000443413 436 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 EEF1E1P1-201ENST00000446998 430 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 snoU13.8-201ENST00000458890 104 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 U3.44-201ENST00000458938 192 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC093281.2-201ENST00000510153 597 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 RNU1-61P-201ENST00000516107 151 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 MRPS36P3-201ENST00000519284 130 ntBASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.96□□□□□ -1.78
SDF4Q9BRK5 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms