Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 PHBP14-201ENST00000512887 367 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 NPM1P41-201ENST00000512920 831 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 MTND5P13-201ENST00000513046 1079 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AL133271.1-201ENST00000538229 291 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC125611.2-201ENST00000551907 647 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 COX6CP3-201ENST00000580869 223 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC011468.4-201ENST00000603942 409 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AP002826.1-201ENST00000608835 315 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AL158063.1-201ENST00000615349 536 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC243312.2-201ENST00000623340 601 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AC112204.3-201ENST00000623822 332 ntBASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NR1H4Q96RI1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 Y_RNA.46-201ENST00000362695 102 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 U3.4-201ENST00000363352 213 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 RNU4-91P-201ENST00000364778 135 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 SNORD116-1-201ENST00000384335 95 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 SEPT2P1-201ENST00000419651 180 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AL360081.1-201ENST00000428299 555 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AL512326.1-201ENST00000443050 721 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AL592447.1-201ENST00000447592 540 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 TPT1P14-201ENST00000448018 505 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 MRPS31P2-201ENST00000451581 518 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC099563.1-201ENST00000456086 418 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC010326.1-201ENST00000462726 602 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 RPL21P126-201ENST00000470049 478 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC091965.2-201ENST00000512324 613 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 MIR4270-201ENST00000581799 70 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AP001981.2-201ENST00000603241 418 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 FAM25E-202ENST00000608562 189 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC090425.2-201ENST00000608818 501 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AP005019.3-201ENST00000620418 560 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC091953.3-201ENST00000623220 236 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC010149.2-201ENST00000637608 315 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 AC009812.4-201ENST00000569134 1805 ntBASIC3.72□□□□□ -1.81
NR1H4Q96RI1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
NR1H4Q96RI1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NR1H4Q96RI1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 DEFB108F-201ENST00000344638 222 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 Y_RNA.77-201ENST00000362962 107 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 RNU6-754P-201ENST00000391166 107 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 RNA5SP397-201ENST00000391323 118 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 RPS20P2-201ENST00000402520 389 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 UQCRBP1-201ENST00000421129 336 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 RPL7AP25-201ENST00000423357 805 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 CYCSP43-201ENST00000438233 310 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 HMGB1P37-201ENST00000439613 609 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 AL162591.2-201ENST00000449634 317 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.71□□□□□ -1.82
NR1H4Q96RI1 RPL32P9-201ENST00000487963 407 ntBASIC3.71□□□□□ -1.82
NR1H4Q96RI1 AC055855.1-201ENST00000489563 579 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms