Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DUX3Q96PT4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 SNORA72.1-201ENST00000363485 129 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 RNU6-744P-201ENST00000365557 107 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 RNU6-1316P-201ENST00000384242 108 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 RNU1-13P-201ENST00000384499 162 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC068050.1-201ENST00000394891 380 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL031679.1-201ENST00000400616 525 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 RNU6-628P-201ENST00000410675 107 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 RN7SKP167-201ENST00000411047 285 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 PDSS1P1-201ENST00000422953 1114 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL157831.1-201ENST00000426134 473 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 FCF1P1-201ENST00000432690 571 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL132765.1-201ENST00000434165 553 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DUX3Q96PT4 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 FAM103A2P-201ENST00000444122 354 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC099563.1-201ENST00000456086 418 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 PLGLA-201ENST00000465668 449 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 RPL7P24-201ENST00000493052 752 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC105914.1-201ENST00000511798 226 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC093677.1-201ENST00000514414 678 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 RN7SKP82-201ENST00000516786 223 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 RNU6-1220P-201ENST00000517126 108 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 OR4A12P-201ENST00000530847 918 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 HSPE1P3-201ENST00000559254 309 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL391840.1-201ENST00000571144 367 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 BNIP3P33-201ENST00000598912 569 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC007687.1-201ENST00000602704 304 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 DUXAP4-201ENST00000603046 613 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL161729.3-201ENST00000603533 673 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL391646.1-201ENST00000603860 190 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC112187.2-201ENST00000604345 283 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC010201.1-201ENST00000605051 540 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC009994.1-201ENST00000606889 253 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL138721.1-201ENST00000616756 179 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC006338.1-201ENST00000618453 749 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 AL359880.1-201ENST00000621879 266 ntBASIC3.29□□□□□ -1.88
DUX3Q96PT4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
DUX3Q96PT4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
DUX3Q96PT4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNU1-108P-201ENST00000362556 161 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 Y_RNA.38-201ENST00000362617 102 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNA5SP307-201ENST00000362863 116 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNA5SP130-201ENST00000364431 114 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNA5SP283-201ENST00000365604 119 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNU6-483P-201ENST00000384088 108 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNU6-1226P-201ENST00000384317 107 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 SNORA37-201ENST00000384504 129 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 RN7SKP266-201ENST00000410232 287 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 JKAMPP1-201ENST00000413804 919 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RPL31P45-201ENST00000419532 356 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AL353193.1-201ENST00000421444 268 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms