Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.65□□□□□ -1.5
CNTNAP3BQ96NU0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 AC024651.2-201ENST00000562480 2098 ntBASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
CNTNAP3BQ96NU0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RNU1-76P-201ENST00000362903 159 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RNA5SP234-201ENST00000363916 119 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-188P-201ENST00000364207 107 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RNY4P28-201ENST00000365281 93 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6-214P-201ENST00000384130 107 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AC069213.2-201ENST00000420238 366 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 SNORD121B-201ENST00000458838 81 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AC092436.3-201ENST00000511788 257 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 RN7SL802P-201ENST00000577858 299 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 NANOGP3-201ENST00000605855 286 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 MIR7159-201ENST00000620587 66 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AL109809.4-201ENST00000603520 2185 ntBASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
CNTNAP3BQ96NU0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC097461.1-201ENST00000568928 2821 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RNY1P16-201ENST00000363063 111 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RNA5SP391-201ENST00000363456 119 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.151-201ENST00000363566 112 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC068538.1-201ENST00000376856 336 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 Y_RNA.497-201ENST00000384447 98 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AL080315.1-201ENST00000406055 466 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 MRPL53P1-201ENST00000414323 319 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 ELOCP18-201ENST00000434209 337 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 CYCSP6-201ENST00000434498 302 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RPS7P3-201ENST00000443360 580 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC239809.1-201ENST00000450470 217 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC084198.1-201ENST00000477747 402 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 AC016559.2-201ENST00000510759 359 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RNU2-69P-201ENST00000516061 100 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 CYCSP27-201ENST00000527643 293 ntBASIC5.63□□□□□ -1.51
CNTNAP3BQ96NU0 HNRNPCP4-201ENST00000571636 900 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms