Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 OR5P1P-201ENST00000299512 925 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL109755.1-201ENST00000401791 649 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 MIR1251-201ENST00000408552 70 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 HMGB3P23-201ENST00000414981 585 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 UBE2FP1-201ENST00000416536 447 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 CYCSP46-201ENST00000423569 204 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL353777.1-201ENST00000425552 326 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 NEK4P1-201ENST00000433383 879 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 MTATP6P26-201ENST00000445926 662 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL590365.1-201ENST00000450788 243 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 RPS27AP1-201ENST00000475545 471 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 RPS15AP36-201ENST00000492022 382 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC020893.1-201ENST00000502452 580 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 RNU7-143P-201ENST00000516781 65 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AP001781.1-201ENST00000530977 207 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 UBE2FP2-201ENST00000566646 462 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL356432.3-201ENST00000568952 465 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 MIR4436B2-201ENST00000581415 91 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC012417.1-201ENST00000582307 1039 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 MIR4436B1-201ENST00000583272 91 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL590229.1-201ENST00000603497 542 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL049539.1-201ENST00000611964 459 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AC104010.1-201ENST00000616889 150 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AP005019.3-201ENST00000620418 560 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 MIR6719-201ENST00000622428 87 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.55□□□□□ -1.84
CMTM3Q96MX0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.55□□□□□ -1.84
CMTM3Q96MX0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 OR56B2P-202ENST00000641377 2453 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 ZNF807-201ENST00000328088 1707 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 RPL7P26-201ENST00000333817 754 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 MIR493-201ENST00000385254 89 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC008850.1-201ENST00000427546 362 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC010468.1-201ENST00000461022 817 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 OR5BM1P-201ENST00000512021 366 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 ZNF519P3-201ENST00000557158 1032 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 MIR4737-201ENST00000583979 81 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 FAM27D1-201ENST00000612308 341 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AL390240.1-201ENST00000612950 384 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 AC008568.2-201ENST00000623862 2313 ntBASIC3.54□□□□□ -1.84
CMTM3Q96MX0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CMTM3Q96MX0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CMTM3Q96MX0 AL121657.1-201ENST00000327215 531 ntBASIC3.53□□□□□ -1.84
CMTM3Q96MX0 RNU5A-8P-201ENST00000364102 114 ntBASIC3.53□□□□□ -1.84
CMTM3Q96MX0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.53□□□□□ -1.84
CMTM3Q96MX0 HLFP1-201ENST00000402375 499 ntBASIC3.53□□□□□ -1.84
CMTM3Q96MX0 Y_RNA.608-201ENST00000410647 95 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms