Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC011944.2-201ENST00000624440 683 ntBASIC4.16□□□□□ -1.74
VPS50Q96JG6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS50Q96JG6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS50Q96JG6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS50Q96JG6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS50Q96JG6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS50Q96JG6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.16□□□□□ -1.74
VPS50Q96JG6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS50Q96JG6 ZNF962P-201ENST00000443465 3140 ntBASIC4.16□□□□□ -1.74
VPS50Q96JG6 MTND5P3-201ENST00000438536 1800 ntBASIC4.16□□□□□ -1.74
VPS50Q96JG6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS50Q96JG6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS50Q96JG6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS50Q96JG6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.15□□□□□ -1.74
VPS50Q96JG6 AC093908.1-201ENST00000623125 8092 ntBASIC4.15□□□□□ -1.74
VPS50Q96JG6 AC093536.2-201ENST00000565257 1406 ntBASIC4.15□□□□□ -1.74
VPS50Q96JG6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 GNG5P1-201ENST00000255500 204 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 MIR423-201ENST00000362201 94 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 RNA5SP388-201ENST00000362584 119 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 Y_RNA.493-201ENST00000384422 102 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 MTND1P23-201ENST00000416931 372 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AF228730.2-201ENST00000438784 848 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 MTCO2P3-201ENST00000442543 421 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 NPM1P49-201ENST00000448027 714 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 RPS3AP17-201ENST00000472594 777 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC022483.1-201ENST00000514020 567 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 RNU6-201P-201ENST00000517100 61 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 DEFB108A-201ENST00000530110 222 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS50Q96JG6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC124947.2-202ENST00000552735 133 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC087481.2-201ENST00000565492 330 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC090615.1-201ENST00000577519 154 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 MIR3939-201ENST00000582614 106 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL020997.2-201ENST00000602607 184 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL359999.1-201ENST00000604513 294 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL022154.1-201ENST00000604698 785 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC004853.1-201ENST00000604902 698 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL049634.3-201ENST00000604968 457 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 PISRT1-201ENST00000626175 531 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AL157786.1-207ENST00000627771 695 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS50Q96JG6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 AC066616.2-201ENST00000559334 1481 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 MTND5P33-201ENST00000571250 1450 ntBASIC4.15□□□□□ -1.75
VPS50Q96JG6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS50Q96JG6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS50Q96JG6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS50Q96JG6 FARSBP1-201ENST00000435808 1778 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS50Q96JG6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 OR5J1P-201ENST00000313544 939 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 OR4G2P-201ENST00000328113 903 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS50Q96JG6 RNU6-263P-201ENST00000363811 107 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RNA5SP366-201ENST00000365454 123 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 MT-TC-201ENST00000387405 66 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 MIR1911-201ENST00000410783 80 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 SNORA74C-2-201ENST00000411179 201 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RHEBP3-201ENST00000411920 351 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RPS20P14-201ENST00000412545 360 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC005517.2-201ENST00000424673 553 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RSL24D1P6-201ENST00000426934 401 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AL451074.3-201ENST00000437709 472 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS50Q96JG6 RABEPKP1-201ENST00000440529 1026 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC114495.1-201ENST00000441274 436 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AL512326.1-201ENST00000443050 721 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC079448.1-201ENST00000449377 373 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS50Q96JG6 RPS20P24-201ENST00000457473 361 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 snoU13.8-201ENST00000458890 104 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 RPL7P15-201ENST00000461190 712 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 FTH1P2-201ENST00000466086 412 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC126182.1-201ENST00000478134 357 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC078817.1-201ENST00000492623 435 ntBASIC4.14□□□□□ -1.75
VPS50Q96JG6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms