Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC068790.5-201ENST00000602741 355 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AC103710.1-201ENST00000610003 901 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 MIR7151-201ENST00000617477 60 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL773545.4-201ENST00000637262 310 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 AL513478.4-201ENST00000641636 310 ntBASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK5RAP3Q96JB5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC016588.2-201ENST00000632484 3021 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 RNU5A-6P-201ENST00000384136 116 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-517P-201ENST00000384362 110 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 MIR1183-201ENST00000408856 89 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC078974.1-201ENST00000411597 223 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 EI24P1-201ENST00000416584 867 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 C1DP2-201ENST00000418167 426 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 OR2B8P-201ENST00000432841 938 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AL138799.3-201ENST00000438968 350 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC108734.1-201ENST00000439549 399 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 TPT1P12-201ENST00000448968 492 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 GAPDHP17-201ENST00000449858 1001 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 TMED11P-201ENST00000479478 690 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 RPL9P33-201ENST00000484311 566 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 MTND1P3-201ENST00000484956 952 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC010460.1-201ENST00000507087 466 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC005921.1-201ENST00000510589 286 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC023141.12-201ENST00000512399 199 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 RN7SKP122-201ENST00000515923 296 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 SNORA70.14-201ENST00000516205 110 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-201P-201ENST00000517100 61 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC022616.6-201ENST00000520479 119 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC016957.1-201ENST00000534895 309 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 RN7SL600P-201ENST00000581811 299 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 CKS1BP3-201ENST00000600888 237 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AL590099.1-201ENST00000615276 138 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AL591424.2-201ENST00000617023 128 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 AC010149.2-201ENST00000637608 315 ntBASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP3Q96JB5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 FRG1BP-201ENST00000278882 761 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 SNORD74.4-201ENST00000364129 80 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 RNU6-359P-201ENST00000365466 108 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 SNORA70C-201ENST00000384538 135 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 Y_RNA.548-201ENST00000384656 105 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC112653.1-201ENST00000443851 386 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC098824.1-201ENST00000453565 980 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 RPL7P15-201ENST00000461190 712 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 RN7SL271P-201ENST00000487601 295 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 OR51K1P-201ENST00000510214 950 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AL117351.2-201ENST00000513571 157 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 RNU2-58P-201ENST00000516403 183 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 MTND1P5-201ENST00000517906 940 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 MTCYBP41-201ENST00000528913 1123 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AP003181.2-201ENST00000528941 181 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AP004242.1-201ENST00000533701 349 ntBASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP3Q96JB5 GNRHR2P1-201ENST00000555315 631 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms