Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 Y_RNA.341-201ENST00000365341 102 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 MTATP8P2-201ENST00000435212 202 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 CR391992.1-201ENST00000438601 394 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 RN7SL325P-201ENST00000460434 283 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC117395.2-201ENST00000463122 1128 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC040975.1-201ENST00000472104 316 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 HSPE1P6-201ENST00000479457 291 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC055733.3-201ENST00000505214 523 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC016559.1-201ENST00000511420 199 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 RN7SKP277-201ENST00000516895 283 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC097381.3-201ENST00000608962 462 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 BX005214.3-202ENST00000619809 325 ntBASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.37□□□□□ -1.39
MS4A3Q96HJ5 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 SNORD115-30-201ENST00000364117 82 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 RNU6-454P-201ENST00000364292 107 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 Y_RNA.310-201ENST00000365063 113 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 RNU6-1264P-201ENST00000383891 107 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 Y_RNA.549-201ENST00000384657 102 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 MIR570-201ENST00000384917 97 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 RPL23AP17-201ENST00000401064 499 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 RNU6-712P-201ENST00000410558 100 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 RPS21P8-201ENST00000413365 247 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 ANP32BP2-201ENST00000454525 545 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AL136139.1-201ENST00000605568 222 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AL513218.1-201ENST00000606527 391 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AL121809.2-201ENST00000613169 341 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AC012213.2-201ENST00000562917 4597 ntBASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MS4A3Q96HJ5 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 RNU6-1285P-201ENST00000363480 105 ntBASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 SNORA66-201ENST00000384792 133 ntBASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 AL590762.2-201ENST00000395798 571 ntBASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 MIR1250-201ENST00000408098 113 ntBASIC6.35□□□□□ -1.39
MS4A3Q96HJ5 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms