Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 RPS3AP24-201ENST00000407896 734 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC009237.10-201ENST00000414112 510 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 RPS29P17-201ENST00000430795 166 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL132765.1-201ENST00000434165 553 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 NPM1P49-201ENST00000448027 714 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 NANOGP10-201ENST00000453325 895 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 C1DP4-201ENST00000455429 424 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 RPS27AP17-201ENST00000463344 455 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 RPL35P6-201ENST00000490024 372 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC068305.1-201ENST00000497406 726 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 SAP18P1-201ENST00000512058 390 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 OR5G4P-201ENST00000525251 760 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 FAM60BP-201ENST00000578364 658 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.6-201ENST00000603753 252 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.11-201ENST00000604059 253 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC067959.1-201ENST00000604334 379 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC008162.1-201ENST00000604718 254 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.1-201ENST00000604752 252 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.5-201ENST00000605253 252 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.12-201ENST00000605291 253 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.8-201ENST00000605353 252 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL670379.7-201ENST00000605823 252 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AL355810.1-201ENST00000614629 552 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC007546.2-201ENST00000623996 360 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 AC124864.2-201ENST00000624736 186 ntBASIC5.71□□□□□ -1.5
ZNF428Q96B54 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF428Q96B54 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.71□□□□□ -1.5
ZNF428Q96B54 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 OR5P1P-201ENST00000299512 925 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 BX295541.1-201ENST00000417774 250 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 MTATP6P4-201ENST00000427725 675 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 GPR143P-201ENST00000434155 205 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 NUTF2P3-201ENST00000448540 384 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC079448.1-201ENST00000449377 373 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 MTCO3P20-201ENST00000454926 688 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 DHFRP3-201ENST00000455595 559 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC007182.2-201ENST00000489251 402 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 RPL9P6-201ENST00000492764 598 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 RN7SL812P-201ENST00000493791 279 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC015795.1-201ENST00000513669 327 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 RNU7-51P-201ENST00000516560 62 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC093012.1-202ENST00000549403 582 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC068790.5-201ENST00000602741 355 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AP000860.1-201ENST00000605250 559 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC004492.1-201ENST00000607036 742 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
ZNF428Q96B54 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF428Q96B54 AC139713.2-215ENST00000641428 5037 ntBASIC5.7□□□□□ -1.5
ZNF428Q96B54 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF428Q96B54 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF428Q96B54 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF428Q96B54 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 MIR331-201ENST00000362302 94 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 RNU6-511P-201ENST00000363496 107 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 MIR708-201ENST00000390708 88 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 TXNP7-201ENST00000406296 293 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 RN7SKP177-201ENST00000410567 355 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 RPL21P24-201ENST00000413752 448 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 AC104850.1-201ENST00000435940 476 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 AC008481.1-201ENST00000463278 396 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 RPS15AP36-201ENST00000492022 382 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 RNU6-410P-201ENST00000517006 107 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 TRAV8-5-201ENST00000537369 341 ntBASIC5.69□□□□□ -1.5
ZNF428Q96B54 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ZNF428Q96B54 AL512310.1-201ENST00000548639 172 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms