Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL732372.2-225ENST00000642124 456 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 MIR372-201ENST00000362225 67 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 RNU5A-1-201ENST00000362698 116 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 RNU6-213P-201ENST00000384051 104 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 U3.20-201ENST00000390909 217 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 MTND4P13-201ENST00000402078 1023 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 MIR1305-201ENST00000408300 86 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 RPS3AP25-201ENST00000411660 793 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 USP9YP36-201ENST00000424581 829 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AL158071.1-201ENST00000430315 461 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 UBE2FP3-201ENST00000436366 524 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC091862.1-201ENST00000438016 1100 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AL109741.2-201ENST00000455561 343 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 HSPE1P6-201ENST00000479457 291 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC026979.1-201ENST00000492525 396 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 TGIF1P1-201ENST00000558095 802 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 MIR6758-201ENST00000620653 63 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC006111.3-201ENST00000622137 383 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC008443.7-201ENST00000622195 246 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 PCMTD1P7-201ENST00000634506 357 ntBASIC3.49□□□□□ -1.85
VPS33AQ96AX1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS33AQ96AX1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC009902.3-201ENST00000606235 2172 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RNA5SP88-201ENST00000365560 109 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RNU1-13P-201ENST00000384499 162 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RNU6-114P-201ENST00000384704 105 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RPS4XP3-201ENST00000398541 413 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 NEK4P1-201ENST00000433383 879 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 SETD6P1-201ENST00000444575 317 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 CDC27P1-201ENST00000445384 715 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AL590664.1-201ENST00000448065 339 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC006539.3-201ENST00000454258 129 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AL049714.1-201ENST00000466686 347 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC084357.1-201ENST00000473404 255 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 HMGN2P13-201ENST00000476476 274 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RPL32P34-201ENST00000486380 400 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 RN7SL323P-201ENST00000494712 295 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 EEF1A1P37-201ENST00000522748 715 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 OR7K1P-201ENST00000546439 926 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC002400.1-201ENST00000569310 726 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 MIR4999-201ENST00000585029 91 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 MIR4443-201ENST00000585052 53 ntBASIC3.48□□□□□ -1.85
VPS33AQ96AX1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS33AQ96AX1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms