Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RNU6-179P-201ENST00000363350 107 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 RNA5SP447-201ENST00000363749 119 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 5S_rRNA.1-201ENST00000364415 116 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 Y_RNA.496-201ENST00000384444 101 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 EIF4E2P1-201ENST00000393781 255 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 RN7SKP114-201ENST00000410327 279 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 AC108734.1-201ENST00000439549 399 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 RPL34P20-201ENST00000442771 351 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 KNOP1P3-201ENST00000446933 426 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 RPL7P52-201ENST00000449200 742 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 RPL22P13-201ENST00000493291 347 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 AC103710.2-201ENST00000609912 942 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 ATP5A1P2-202ENST00000616464 443 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 AL445567.2-201ENST00000618935 498 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.71□□□□□ -1.02
TRIM41Q8WV44 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM41Q8WV44 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC107081.3-201ENST00000612715 2034 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 Y_RNA.234-201ENST00000364409 97 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 Y_RNA.473-201ENST00000384333 102 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 PSMA6P3-201ENST00000428242 164 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AL590233.1-201ENST00000430017 456 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC008526.1-201ENST00000509149 338 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AL137161.1-201ENST00000532231 390 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 SETP2-201ENST00000553886 926 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC009229.3-201ENST00000608056 282 ntBASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
TRIM41Q8WV44 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 SNORD3E-201ENST00000362899 217 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RNU6-593P-201ENST00000364716 112 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RNU6-225P-201ENST00000384613 103 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 AL360182.1-201ENST00000397433 468 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 DSTNP4-201ENST00000399472 474 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RNU2-64P-201ENST00000411315 191 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RPL36P19-201ENST00000430744 301 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 AC002553.2-201ENST00000453217 340 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 AC108059.3-201ENST00000456388 214 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 TRBV26-201ENST00000456572 344 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RNU6-406P-201ENST00000516470 107 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RNU1-45P-201ENST00000517191 141 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 AL137100.2-201ENST00000555786 315 ntBASIC8.69□□□□□ -1.02
TRIM41Q8WV44 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM41Q8WV44 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 Y_RNA.288-201ENST00000364854 92 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 MIR554-201ENST00000384874 96 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 DDX39BP1-205ENST00000422507 192 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 RPL12P34-201ENST00000424532 479 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 MTCO3P45-201ENST00000443036 613 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 RPL12P20-201ENST00000475538 479 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 AC135001.1-201ENST00000544546 283 ntBASIC8.68□□□□□ -1.02
TRIM41Q8WV44 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
TRIM41Q8WV44 AC012468.1-201ENST00000604888 430 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms