Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 HMGN2P38-201ENST00000423806 265 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 ELOCP13-201ENST00000443934 329 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RPL21P16-201ENST00000495531 483 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC121758.2-201ENST00000553271 193 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 ISCA1P3-201ENST00000577104 373 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AP005901.5-201ENST00000545779 1796 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AL513175.2-201ENST00000422071 443 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 SNRPFP2-201ENST00000440710 251 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 FABP5P13-201ENST00000452144 328 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 MTND5P4-201ENST00000514978 288 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 MIR4474-201ENST00000579189 78 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AL160237.3-201ENST00000604114 1013 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AL589994.2-201ENST00000621124 579 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RNU6-457P-201ENST00000363999 107 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 Y_RNA.269-201ENST00000364685 89 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC104332.2-201ENST00000429959 156 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 snoZ278.1-201ENST00000517059 112 ntBASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.46□□□□□ -2.18
ALMS1Q8TCU4 RNU1-138P-201ENST00000384093 164 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 RPS7P5-201ENST00000441482 581 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC005912.1-201ENST00000495392 255 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 GTF2IP9-201ENST00000502460 301 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC108078.2-201ENST00000510750 236 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 HSPE1P18-201ENST00000517602 280 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 MIR5002-201ENST00000584713 97 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC008083.2-201ENST00000546707 476 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 MTND2P16-201ENST00000419987 799 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 snoU13.18-201ENST00000459483 104 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC073901.1-201ENST00000462471 408 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AP005136.1-201ENST00000579765 429 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 AL022099.1-201ENST00000604551 712 ntBASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.45□□□□□ -2.18
ALMS1Q8TCU4 U3.37-201ENST00000408528 213 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 ARPC3P2-201ENST00000457786 533 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 RNA5SP480-201ENST00000516840 109 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 MFSD8-245ENST00000641743 948 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC109780.2-201ENST00000413467 845 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 MTCO1P42-201ENST00000457379 726 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 RPL21P39-201ENST00000463605 483 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 RNA5SP82-201ENST00000516707 92 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AL109809.4-201ENST00000603520 2185 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 SNRPGP9-201ENST00000456025 225 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC026241.1-201ENST00000517873 2142 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AP004372.1-201ENST00000604842 844 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AC003989.2-201ENST00000440224 169 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 AL118520.1-201ENST00000450770 291 ntBASIC1.44□□□□□ -2.18
ALMS1Q8TCU4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms