Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC012182.1-201ENST00000570133 895 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC091042.1-201ENST00000579213 173 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC022432.1-201ENST00000595739 310 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC068790.5-201ENST00000602741 355 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC012507.3-201ENST00000603556 477 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC245014.2-201ENST00000603689 287 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AP001836.1-201ENST00000604675 523 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC246785.4-201ENST00000605374 287 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AC011816.2-201ENST00000607089 556 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 MIR7703-201ENST00000620784 77 ntBASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
SIMC1Q8NDZ2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC027290.2-201ENST00000623210 18662 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 Y_RNA.86-201ENST00000363020 111 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 SNORA63-201ENST00000363450 132 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RN7SKP44-201ENST00000363602 316 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RNA5SP505-201ENST00000364748 108 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RNA5SP167-201ENST00000365461 116 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RHOT1P2-201ENST00000366423 333 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 Y_RNA.460-201ENST00000384255 102 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RNU6-769P-201ENST00000384407 104 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AL049693.1-201ENST00000402760 611 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AL603766.1-201ENST00000407763 664 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RNU6-908P-201ENST00000410160 94 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RNA5SP239-201ENST00000410218 129 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RN7SKP27-201ENST00000410684 333 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC140479.3-201ENST00000418944 1126 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AL445669.1-201ENST00000426743 755 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 PSMA6P3-201ENST00000428242 164 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 ATP5HP2-201ENST00000433885 485 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 MTND4P19-201ENST00000446659 478 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC132479.1-201ENST00000449160 144 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 ST13P14-201ENST00000474095 734 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RPL36AP41-201ENST00000493820 306 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RPS4XP18-201ENST00000495480 763 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 HMGN1P13-201ENST00000505795 138 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 HIF1AP1-201ENST00000553642 175 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 SNORD84-203ENST00000584275 78 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC005255.1-201ENST00000593748 216 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 CKS1BP3-201ENST00000600888 237 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC020634.1-201ENST00000608701 549 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 MIR6758-201ENST00000620653 63 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 AC090574.1-201ENST00000623186 233 ntBASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIMC1Q8NDZ2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 GNG5P1-201ENST00000255500 204 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 RNU6-1227P-201ENST00000383981 107 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 SNORD51-201ENST00000384320 80 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 RNU6-332P-201ENST00000391193 108 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 MIR1302-11-201ENST00000408051 138 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 MIR1305-201ENST00000408300 86 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 MIR1302-9-201ENST00000408365 138 ntBASIC4.34□□□□□ -1.71
SIMC1Q8NDZ2 MIR1302-10-201ENST00000408734 138 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms