Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 OR52B1P-201ENST00000316506 909 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 MTND4LP20-201ENST00000402379 270 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 EIF1P3-201ENST00000423841 334 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL353777.1-201ENST00000425552 326 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 ISCA1P6-201ENST00000427740 390 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 MTCYBP45-201ENST00000435243 565 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 MTCO3P20-201ENST00000454926 688 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 RPL38P1-201ENST00000460914 211 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AP001486.1-201ENST00000463339 476 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC108078.1-201ENST00000508073 725 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC005798.1-201ENST00000513715 387 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 RNU2-46P-201ENST00000517038 113 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC234778.2-201ENST00000566241 354 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 CYCSP40-201ENST00000575927 294 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC067852.4-201ENST00000590314 478 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL355812.1-201ENST00000603215 216 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC245014.2-201ENST00000603689 287 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC246785.4-201ENST00000605374 287 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC121334.2-201ENST00000605387 271 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AF250324.2-201ENST00000608299 610 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AC124864.2-201ENST00000624736 186 ntBASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SMC1BQ8NDV3 AL672167.1-205ENST00000641112 3080 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 AL121834.1-202ENST00000404494 277 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 BTF3P7-201ENST00000407097 488 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 AL603766.1-201ENST00000407763 664 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 USP9YP18-201ENST00000425912 695 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC108734.1-201ENST00000439549 399 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 PTMAP3-201ENST00000447474 330 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC104651.2-201ENST00000447549 528 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 RPS20P24-201ENST00000457473 361 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 RPS4XP10-201ENST00000465034 731 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC108751.2-201ENST00000469993 231 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC012170.1-201ENST00000495139 359 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 OR5H5P-201ENST00000503164 928 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 FTH1P9-201ENST00000513251 355 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SMC1BQ8NDV3 SETP2-201ENST00000553886 926 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC009159.1-201ENST00000618386 642 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 AC068880.5-201ENST00000624331 290 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 ELF2P3-201ENST00000445099 1506 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 ZNF33CP-201ENST00000432492 2030 ntBASIC5□□□□□ -1.61
SMC1BQ8NDV3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5□□□□□ -1.61
SMC1BQ8NDV3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 Y_RNA.248-201ENST00000364501 109 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 MT-TC-201ENST00000387405 66 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 SNORA48.2-201ENST00000390926 124 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AL122016.1-201ENST00000403365 367 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 RNA5SP146-201ENST00000410743 123 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 PIGFP2-201ENST00000421400 651 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 EIF4HP2-201ENST00000424380 563 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 MTND4LP10-201ENST00000435146 291 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 UBE2DNL-203ENST00000474922 222 ntBASIC4.99□□□□□ -1.61
SMC1BQ8NDV3 RPL23AP41-201ENST00000484754 458 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms