Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 SNRPCP3-201ENST00000474888 476 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 RPS29P19-201ENST00000479709 171 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 PCBP2P3-201ENST00000509726 843 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 SNORA19.2-201ENST00000516013 114 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 RNU6-327P-201ENST00000516270 127 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC023050.3-201ENST00000541142 333 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 LSM6P2-201ENST00000552208 177 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AL360085.1-201ENST00000604713 532 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 uc_338.5-201ENST00000611839 155 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC233309.1-201ENST00000619522 751 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC107068.1-201ENST00000563286 4218 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 AC116667.1-201ENST00000604855 2072 ntBASIC5.33□□□□□ -1.56
LINC00116Q8NCU8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 RNU6-169P-201ENST00000365336 107 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 SNORA32.2-201ENST00000384049 122 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 SNORA51.6-201ENST00000384151 125 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 DSTNP4-201ENST00000399472 474 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 MIR921-201ENST00000401133 56 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 MIR1911-201ENST00000410783 80 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 HSPE1P28-201ENST00000443139 211 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC104164.2-201ENST00000496953 495 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 RNU6-1045P-201ENST00000516321 107 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 RNA5SP230-201ENST00000517039 122 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 OR5B19P-201ENST00000531766 928 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC012182.1-201ENST00000570133 895 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC010525.2-201ENST00000590920 195 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AL391813.2-201ENST00000609113 322 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC093913.1-201ENST00000614178 329 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 AC009248.2-201ENST00000619826 254 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
LINC00116Q8NCU8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC105074.1-201ENST00000623380 3095 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 Y_RNA.138-201ENST00000363462 102 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RNU4-1-201ENST00000363925 141 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 SNORD66.1-201ENST00000391230 76 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL591416.1-201ENST00000404015 867 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL354719.1-201ENST00000406535 843 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 HSPE1P12-201ENST00000412576 301 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 MTCO3P46-201ENST00000425787 232 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RPL36P19-201ENST00000430744 301 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RPL23AP25-201ENST00000430973 463 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RPL23AP30-201ENST00000432419 501 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AP000936.3-201ENST00000438127 255 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RPL23AP46-201ENST00000438548 490 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RPS15AP9-201ENST00000439856 381 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 APOOP2-201ENST00000461561 539 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC096576.1-201ENST00000489014 359 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 AC110792.1-201ENST00000491826 472 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 RNU6-277P-201ENST00000516272 106 ntBASIC5.31□□□□□ -1.56
LINC00116Q8NCU8 SNORD60.2-201ENST00000516883 86 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms