Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPL7P44-201ENST00000424827 742 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC005019.1-201ENST00000436455 431 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AL591719.1-201ENST00000444669 744 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC005297.2-201ENST00000450430 606 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 ARPC3P2-201ENST00000457786 533 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC005410.1-202ENST00000460347 485 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 HMGN2P13-201ENST00000476476 274 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC021205.2-201ENST00000480069 347 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 RPL21P13-201ENST00000488305 481 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 SLC2A13P1-201ENST00000531560 322 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 MED28P6-201ENST00000558776 231 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC090695.1-201ENST00000561269 1222 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AP005205.1-201ENST00000563503 508 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC021749.1-201ENST00000604322 607 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC106900.2-201ENST00000604994 317 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC092106.3-201ENST00000611308 722 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC243773.3-201ENST00000613270 256 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC023158.2-201ENST00000614876 543 ntBASIC3.46□□□□□ -1.86
RTL3Q8N8U3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTL3Q8N8U3 AC109315.1-201ENST00000584143 1347 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 CR383658.2-201ENST00000547576 1525 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC097714.1-201ENST00000511272 1647 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MIR30E-201ENST00000362104 92 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MIR23B-201ENST00000384832 97 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MIR7-3-201ENST00000384898 110 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 TAS2R15P-201ENST00000390674 928 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 RNA5SP171-201ENST00000391071 115 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AF228730.1-201ENST00000397972 663 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 BX323014.1-201ENST00000412876 237 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AL356968.1-201ENST00000416622 474 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC005005.2-201ENST00000420779 380 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC097713.2-201ENST00000430199 356 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 CETN4P-201ENST00000432407 469 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MTCO2P20-201ENST00000437339 673 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 HSPE1P28-201ENST00000443139 211 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 PRDX3P3-201ENST00000447765 522 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MRPS31P2-201ENST00000451581 518 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC023424.2-201ENST00000493479 777 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC090453.1-201ENST00000495560 436 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC114981.1-201ENST00000503897 678 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC022861.1-201ENST00000522981 663 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 HSPA8P13-201ENST00000523715 472 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 HIGD1AP17-201ENST00000554576 276 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AP001269.3-201ENST00000588718 329 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC091057.2-201ENST00000602594 792 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 BNIP3P11-201ENST00000603878 563 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC012443.1-201ENST00000605605 231 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 MIR7975-201ENST00000619350 68 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC013470.4-201ENST00000619978 986 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 AC006111.3-201ENST00000622137 383 ntBASIC3.45□□□□□ -1.86
RTL3Q8N8U3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RTL3Q8N8U3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RNU6-55P-201ENST00000411092 107 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RNU6-954P-201ENST00000411355 107 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 YME1L1P1-201ENST00000429435 297 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL590233.1-201ENST00000430017 456 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 MTND4P6-201ENST00000438297 472 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 MTND2P20-201ENST00000440805 661 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL358232.1-201ENST00000448030 501 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.44□□□□□ -1.86
RTL3Q8N8U3 AP001992.1-205ENST00000462248 379 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RPL23AP14-201ENST00000468281 468 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 RN7SL330P-201ENST00000469709 307 ntBASIC3.44□□□□□ -1.86
RTL3Q8N8U3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms