Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AL450338.1-201ENST00000407987 512 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 BEND7P1-201ENST00000422058 457 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AL590233.1-201ENST00000430017 456 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AL590664.1-201ENST00000448065 339 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC097262.1-201ENST00000452559 548 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC004801.2-202ENST00000463559 283 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC011825.1-201ENST00000484967 388 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 RPL21P13-201ENST00000488305 481 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 RPL7P38-201ENST00000488396 739 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 RNU6-1225P-201ENST00000516336 65 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 OR10V3P-201ENST00000525712 725 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 PDCL2P2-201ENST00000533651 189 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 HSPE1P3-201ENST00000559254 309 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 DUXAP11-201ENST00000603858 526 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC008121.2-201ENST00000614647 523 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC092628.2-201ENST00000622492 339 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 AC097714.1-201ENST00000511272 1647 ntBASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.37□□□□□ -1.87
HDDC3Q8N4P3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC058791.1-201ENST00000608412 3198 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 snoZ40.1-201ENST00000364540 72 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RNU6-1257P-201ENST00000384625 110 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 SNORA1.3-201ENST00000384676 136 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AL356131.1-201ENST00000405826 414 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AL138885.1-201ENST00000405921 675 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RPL5P18-201ENST00000406671 891 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RNU2-43P-201ENST00000410306 190 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RNU4-47P-201ENST00000410876 114 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RPL27AP8-201ENST00000424277 446 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 HSPE1P28-201ENST00000443139 211 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RSL24D1P3-201ENST00000449255 495 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC096576.1-201ENST00000489014 359 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC090453.1-201ENST00000495560 436 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 TMEM251P1-201ENST00000503717 318 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC010265.1-201ENST00000513509 211 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC022861.1-201ENST00000522981 663 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC022080.3-201ENST00000544433 482 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC015688.2-201ENST00000584523 262 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 MIR7106-201ENST00000612419 65 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 RNVU1-4-201ENST00000612985 164 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC243773.3-201ENST00000613270 256 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 AC073348.1-201ENST00000623002 331 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 OR1S1-201ENST00000624470 978 ntBASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.36□□□□□ -1.87
HDDC3Q8N4P3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 RNU1-140P-201ENST00000365040 165 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 RNU6-1122P-201ENST00000384449 107 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AL357075.1-201ENST00000404107 726 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AC063979.1-201ENST00000415539 377 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 GTF2IP3-201ENST00000433887 494 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AC024082.2-201ENST00000434771 238 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AL592447.1-201ENST00000447592 540 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AC104164.3-201ENST00000467363 1258 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AC093752.1-206ENST00000511823 336 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 SNORA70.16-201ENST00000516390 95 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 AP001207.2-201ENST00000519490 539 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 SLC2A13P1-201ENST00000531560 322 ntBASIC3.35□□□□□ -1.87
HDDC3Q8N4P3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms