Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AC079741.1-201ENST00000321498 212 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.146-201ENST00000363549 102 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-701P-201ENST00000384059 107 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-76P-201ENST00000384060 104 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-574P-201ENST00000384265 107 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-463P-201ENST00000384340 107 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 SOD2P1-201ENST00000396543 562 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNA5SP113-201ENST00000410486 84 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RN7SKP17-201ENST00000411242 351 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AL118520.1-201ENST00000450770 291 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AL590639.1-201ENST00000456484 337 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU7-180P-201ENST00000459240 63 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 snoU13.29-201ENST00000459370 104 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RN7SL459P-201ENST00000481078 302 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-1046P-201ENST00000516538 107 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-352P-201ENST00000516908 107 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 RNU6-677P-201ENST00000516914 101 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AP006289.1-201ENST00000538089 277 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 BNIP3P5-201ENST00000562290 498 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 SNRPGP17-201ENST00000603780 214 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AL138889.2-201ENST00000603883 242 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AL391358.1-201ENST00000605342 190 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AC104237.2-201ENST00000612456 443 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AL390240.1-201ENST00000612950 384 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AP004289.2-201ENST00000444413 1457 ntBASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.49□□□□□ -1.53
NPAS4Q8IUM7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.145-201ENST00000363527 102 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU1-32P-201ENST00000363937 159 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.259-201ENST00000364619 101 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU4-20P-201ENST00000365601 151 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU6-38P-201ENST00000384085 107 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU6-190P-201ENST00000384154 102 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU6-43P-201ENST00000384302 107 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.530-201ENST00000384587 101 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AL356967.1-201ENST00000406305 431 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RPS23P10-201ENST00000416185 486 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RPL7P46-201ENST00000425129 740 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC108059.2-201ENST00000434626 151 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 HMGB1P18-201ENST00000438801 619 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 NEFMP1-201ENST00000443423 1006 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU6-333P-201ENST00000459117 107 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RNU6-953P-201ENST00000459154 107 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 RN7SL814P-201ENST00000487715 300 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC021146.2-201ENST00000504736 556 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MLLT10P2-201ENST00000506434 249 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MRPS33P2-201ENST00000507850 322 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC106782.4-201ENST00000568264 210 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MIR3668-201ENST00000582138 75 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MIR7853-201ENST00000584820 132 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AL731566.2-201ENST00000618971 317 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MIR7703-201ENST00000620784 77 ntBASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms