Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
NUP54Q7Z3B4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
NUP54Q7Z3B4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUP54Q7Z3B4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
NUP54Q7Z3B4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUP54Q7Z3B4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 RNU6-343P-201ENST00000364709 104 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 RNA5SP88-201ENST00000365560 109 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 RPL32P23-201ENST00000397237 405 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 RN7SKP159-201ENST00000410657 292 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 UBE2FP3-201ENST00000436366 524 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 Z74696.2-201ENST00000436514 498 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL353691.1-201ENST00000451332 387 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 ART2BP-201ENST00000453501 499 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 RNA5SP310-201ENST00000459084 116 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC104563.1-201ENST00000476147 376 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC084198.1-201ENST00000477747 402 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC093809.1-201ENST00000509155 340 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC093677.1-201ENST00000514414 678 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 RNU6-678P-201ENST00000516832 109 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC022695.1-201ENST00000522089 237 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 CR383656.7-201ENST00000548164 174 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL353997.4-201ENST00000586196 166 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL022099.1-201ENST00000604551 712 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL137849.1-201ENST00000604767 169 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AC090186.1-201ENST00000605991 572 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL031667.3-201ENST00000620124 655 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 CRYM-AS1-204ENST00000637983 556 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 TAB3P1-202ENST00000452645 1634 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 AL079305.1-201ENST00000623159 3008 ntBASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
NUP54Q7Z3B4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RNU6-723P-201ENST00000383973 107 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RPS4XP3-201ENST00000398541 413 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RN7SKP156-201ENST00000410308 342 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 SNORA57.3-201ENST00000411095 141 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC234781.2-201ENST00000426370 994 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL591419.1-201ENST00000427423 339 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 MTCYBP45-201ENST00000435243 565 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 UBE2D3P1-201ENST00000436669 444 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 SETD6P1-201ENST00000444575 317 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 OR6K5P-201ENST00000447050 945 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL359073.1-201ENST00000448036 403 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL590664.1-201ENST00000448065 339 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 MTCO1P27-201ENST00000448269 226 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 PAXBP1P1-201ENST00000449315 447 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC006480.1-201ENST00000449887 378 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AL133217.1-201ENST00000450980 425 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RPL30P14-201ENST00000482744 348 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RPL32P34-201ENST00000486380 400 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 MTND4LP22-201ENST00000508209 276 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 TXNP6-201ENST00000510190 310 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 LTV1P1-201ENST00000510683 1237 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC026402.1-201ENST00000513642 170 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 RNU6-352P-201ENST00000516908 107 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
NUP54Q7Z3B4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms