Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 AC108467.2-201ENST00000617640 1597 ntBASIC5.25□□□□□ -1.57
RUFY4Q6ZNE9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 SALL4P2-201ENST00000423288 2910 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 NACAP2-201ENST00000318548 624 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RNU5E-8P-201ENST00000363502 116 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 SNORD81.2-201ENST00000365153 76 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 Y_RNA.367-201ENST00000365544 101 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-510P-201ENST00000391239 108 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RNA5SP397-201ENST00000391323 118 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AL365400.1-201ENST00000431854 640 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RPS20P1-201ENST00000434853 354 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RPL35AP22-201ENST00000436855 335 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC126389.1-201ENST00000477436 290 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 Y_RNA.675-201ENST00000516389 149 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 BNIP3P6-201ENST00000549284 499 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC087477.6-201ENST00000559595 843 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 CYCSP40-201ENST00000575927 294 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 AL122125.1-201ENST00000616999 600 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 EIF2AP4-201ENST00000424793 1781 ntBASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
RUFY4Q6ZNE9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 OR4G1P-203ENST00000641984 1631 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 ZNF33CP-201ENST00000432492 2030 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-511P-201ENST00000363496 107 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 RNA5SP447-201ENST00000363749 119 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-1078P-201ENST00000364522 103 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 SNORA51.2-201ENST00000364595 132 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AL591416.1-201ENST00000404015 867 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 ARL4AP5-201ENST00000404372 599 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 EEF1A1P40-201ENST00000412883 573 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC140479.3-201ENST00000418944 1126 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 PDCL2P1-201ENST00000419302 352 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 MRPL48P1-201ENST00000445390 636 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 RPL7P12-201ENST00000446719 750 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC053481.1-201ENST00000467217 306 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC108751.2-201ENST00000469993 231 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC020893.1-201ENST00000502452 580 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC005798.1-201ENST00000513715 387 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 RNU7-51P-201ENST00000516560 62 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 Y_RNA.719-201ENST00000517156 106 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC010525.2-201ENST00000590920 195 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC064836.2-201ENST00000609491 462 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AL603758.1-201ENST00000618654 241 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AC027287.1-201ENST00000553115 1453 ntBASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RUFY4Q6ZNE9 AL157700.1-201ENST00000561973 1432 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 223.3 ms