Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC022655.2-201ENST00000577280 318 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 VN1R82P-201ENST00000601481 356 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL596327.1-201ENST00000603629 213 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC013553.2-201ENST00000604244 589 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC090912.3-201ENST00000609775 533 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC008121.2-201ENST00000614647 523 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL161629.2-201ENST00000615347 275 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC090132.2-201ENST00000615881 347 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL136981.2-201ENST00000617319 734 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL078595.3-201ENST00000623815 1166 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 OR4G3P-201ENST00000633500 913 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 FAM35CP-201ENST00000554755 2470 ntBASIC3.34□□□□□ -1.88
C11orf88Q6PI97 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
C11orf88Q6PI97 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.88
C11orf88Q6PI97 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
C11orf88Q6PI97 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 RNU6-799P-201ENST00000363567 107 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 RNU1-39P-201ENST00000383897 165 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 SNORA36C-201ENST00000384289 132 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL356095.1-201ENST00000417217 199 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC069157.1-201ENST00000421749 137 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL512844.2-201ENST00000433990 593 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 RPL21P89-201ENST00000444021 467 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 USP9YP10-201ENST00000454868 628 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 RPL7P15-201ENST00000461190 712 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 OR5AP1P-201ENST00000529730 940 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 OR7K1P-201ENST00000546439 926 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 CCNG2P1-201ENST00000549521 1000 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC124947.2-202ENST00000552735 133 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL355836.1-201ENST00000555951 870 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC106785.1-201ENST00000565935 262 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 BNIP3P33-201ENST00000598912 569 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL109618.2-201ENST00000605527 211 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC009268.2-201ENST00000621925 457 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AL161637.1-201ENST00000622380 412 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 AC019226.1-201ENST00000625666 515 ntBASIC3.33□□□□□ -1.88
C11orf88Q6PI97 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C11orf88Q6PI97 DDX10P1-201ENST00000448545 1933 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 SNORA23-201ENST00000365128 182 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 RNU6-432P-201ENST00000384196 109 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 MIR184-201ENST00000384962 84 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 RN7SKP202-201ENST00000410439 330 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 MTCO1P17-201ENST00000411522 491 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 ELOCP9-201ENST00000418624 239 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC013410.2-201ENST00000422627 201 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC007919.1-201ENST00000429380 217 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.32□□□□□ -1.88
C11orf88Q6PI97 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
C11orf88Q6PI97 AC092185.1-201ENST00000491371 97 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms