Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.86□□□□□ -1.79
ZNF549Q6P9A3 ASNSP1-201ENST00000518311 1939 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 RNU6-181P-201ENST00000363225 107 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 RNU6-146P-201ENST00000384602 108 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 SNORD115.1-201ENST00000391109 76 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 HMGB1P17-201ENST00000403495 628 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 OR51A5P-201ENST00000415429 942 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC073136.2-201ENST00000417282 849 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC234782.4-201ENST00000417646 1048 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC245054.1-201ENST00000420944 258 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 NPM1P24-201ENST00000428039 894 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 TIMM9P3-201ENST00000428659 274 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 RPS20P1-201ENST00000434853 354 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 OR4C10P-201ENST00000434991 931 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 USP9YP8-201ENST00000441913 500 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AL500522.2-201ENST00000448562 343 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 OR6K1P-201ENST00000456766 971 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 RNU6-358P-201ENST00000516564 75 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 RNU2-46P-201ENST00000517038 113 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AP003467.2-201ENST00000520175 319 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 FAM92A1P1-201ENST00000528023 890 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AL391840.1-201ENST00000571144 367 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC022916.3-201ENST00000592961 742 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 BNIP3P9-201ENST00000603714 553 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC008277.2-201ENST00000605196 797 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC016727.1-205ENST00000605437 569 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AP003117.2-201ENST00000606010 545 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC243654.2-201ENST00000612843 443 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.804-201ENST00000615262 101 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC099654.5-201ENST00000636479 350 ntBASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZNF549Q6P9A3 FARSBP1-201ENST00000435808 1778 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MIR372-201ENST00000362225 67 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RNU1-13P-201ENST00000384499 162 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MIR708-201ENST00000390708 88 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MIR1305-201ENST00000408300 86 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RNU4-55P-201ENST00000410731 137 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 BX295541.1-201ENST00000417774 250 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC008280.1-201ENST00000418851 412 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 USP9YP36-201ENST00000424581 829 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC009965.2-201ENST00000425328 970 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MTCO1P48-201ENST00000448024 1096 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RPL23AP15-201ENST00000450202 459 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 Z82190.1-201ENST00000454534 490 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC133473.1-201ENST00000455173 299 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RPL37P3-201ENST00000456825 293 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 MTCO1P42-201ENST00000457379 726 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AC092757.1-201ENST00000467293 467 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RPS15AP17-201ENST00000470598 390 ntBASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZNF549Q6P9A3 AP000852.1-201ENST00000472460 573 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms