Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 RN7SL174P-201ENST00000475578 289 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC092451.1-201ENST00000480211 153 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 RBBP4P6-201ENST00000508098 202 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC092470.1-201ENST00000546187 132 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AL049779.2-201ENST00000553847 315 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC018552.1-201ENST00000562099 811 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 AC012443.1-201ENST00000605605 231 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 MTCO1P24-201ENST00000515438 1558 ntBASIC6.21□□□□□ -1.42
RNF20Q5VTR2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
RNF20Q5VTR2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC073136.1-201ENST00000449426 2884 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AL606537.1-201ENST00000607258 2011 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 RNA5SP183-201ENST00000362452 119 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 RN7SKP160-201ENST00000363804 340 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 Y_RNA.594-201ENST00000410373 140 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AL389925.1-201ENST00000432257 728 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 FTLP19-201ENST00000433300 394 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC108161.1-201ENST00000461060 402 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 DYNLL1P5-201ENST00000467158 270 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 UBA52P7-201ENST00000486088 380 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 Y_RNA.668-201ENST00000516233 93 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AL121612.2-201ENST00000612261 482 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC109309.2-201ENST00000612597 332 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC078938.1-201ENST00000620993 318 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.2□□□□□ -1.42
RNF20Q5VTR2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF20Q5VTR2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RNU6-490P-201ENST00000362985 107 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RNU6-1109P-201ENST00000391187 107 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AC108075.1-201ENST00000424692 529 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 CYCSP24-201ENST00000445119 316 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AC022034.3-201ENST00000471393 478 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 OR2AO1P-201ENST00000476497 403 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RPL30P11-201ENST00000495304 339 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RNU6-1092P-201ENST00000516955 87 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RNU1-54P-201ENST00000517181 120 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 DYNLL1P4-201ENST00000549314 266 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 SULT1C2P2-201ENST00000562517 294 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 MIR3936-201ENST00000584304 110 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 MIR4293-201ENST00000584305 78 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 MIR5692C1-201ENST00000585309 91 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 FKBP1AP1-201ENST00000594588 318 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AC011445.2-201ENST00000599274 173 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 AC138627.2-201ENST00000624202 601 ntBASIC6.19□□□□□ -1.42
RNF20Q5VTR2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF20Q5VTR2 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 THAP12P5-201ENST00000405864 2275 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RNU1-130P-201ENST00000363930 160 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 RNU6-1078P-201ENST00000364522 103 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 Y_RNA.428-201ENST00000384078 102 ntBASIC6.18□□□□□ -1.42
RNF20Q5VTR2 Y_RNA.485-201ENST00000384395 102 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms