Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MTCO3P44-201ENST00000510977 541 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 MYL12AP1-201ENST00000518490 515 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 HMGN2P28-201ENST00000606102 262 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 CRYM-AS1-204ENST00000637983 556 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 SNRPFP4-201ENST00000456366 242 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 VN1R17P-201ENST00000472048 1090 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC034222.1-201ENST00000494052 532 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 FABP5P5-201ENST00000515537 406 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC006484.1-201ENST00000435086 1884 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 YPEL5P1-201ENST00000419731 367 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 TGIF1P1-201ENST00000558095 802 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC079298.2-201ENST00000623885 459 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 RNA5SP354-201ENST00000391247 136 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC234782.4-201ENST00000417646 1048 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 HMGB3P11-201ENST00000440127 604 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 OR8L1P-201ENST00000534005 955 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AC141257.3-201ENST00000572906 215 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 MIR3605-201ENST00000583214 100 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AL445305.1-201ENST00000432577 575 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 SNORA9.3-201ENST00000516383 129 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 APOOP3-201ENST00000536787 586 ntBASIC1.24□□□□□ -2.21
UBR4Q5T4S7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBR4Q5T4S7 AL139811.1-201ENST00000424779 2299 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 THAP5P1-201ENST00000439089 262 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC009237.8-201ENST00000445492 379 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC079203.1-201ENST00000487972 404 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC084768.2-201ENST00000622736 221 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 RNU6-39P-201ENST00000384344 107 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AL445669.1-201ENST00000426743 755 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC012182.1-201ENST00000570133 895 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 GTF2H2B-203ENST00000508065 1432 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 RNA5SP456-201ENST00000364002 114 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 RPL23AP45-201ENST00000476406 468 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 RPL23AP84-201ENST00000571193 464 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC009902.3-201ENST00000606235 2172 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 HMGN1P18-201ENST00000457642 277 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC073901.1-201ENST00000462471 408 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 AC245517.5-201ENST00000611529 162 ntBASIC1.23□□□□□ -2.21
UBR4Q5T4S7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
UBR4Q5T4S7 MTND5P9-201ENST00000503854 1755 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 RNU6-48P-201ENST00000384161 107 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 RPS26P40-201ENST00000435209 294 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC104389.3-201ENST00000445629 235 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC096992.1-201ENST00000459808 709 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 ST13P14-201ENST00000474095 734 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC100870.1-201ENST00000522035 505 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AC104581.2-201ENST00000572227 430 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 AL589743.1-201ENST00000551932 2712 ntBASIC1.22□□□□□ -2.21
UBR4Q5T4S7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
UBR4Q5T4S7 MIR148B-201ENST00000362252 99 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms