Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC109486.1-201ENST00000486833 374 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.74□□□□□ -2.13
TFF3Q07654 SCARNA17.1-201ENST00000516211 143 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 SCARNA17.2-201ENST00000516334 143 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 IGLV3-17-201ENST00000519099 244 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.74□□□□□ -2.13
TFF3Q07654 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.74□□□□□ -2.13
TFF3Q07654 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.74□□□□□ -2.13
TFF3Q07654 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.74□□□□□ -2.13
TFF3Q07654 MYL12BP1-201ENST00000569826 507 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.74□□□□□ -2.13
TFF3Q07654 SCARNA17.4-201ENST00000614296 143 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 AC114546.3-201ENST00000623582 1734 ntBASIC1.74□□□□□ -2.13
TFF3Q07654 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TFF3Q07654 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TFF3Q07654 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TFF3Q07654 AC007256.1-201ENST00000392253 2765 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TFF3Q07654 RNA5SP295-201ENST00000362655 121 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TFF3Q07654 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.73□□□□□ -2.13
TFF3Q07654 AC108667.1-201ENST00000428618 249 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 OR4K11P-201ENST00000431829 904 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 SDR42E1P3-201ENST00000438345 502 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 RPS26P30-201ENST00000443431 335 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 AP000926.3-201ENST00000497201 299 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 AC135721.1-201ENST00000497954 479 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 RPL37P25-201ENST00000507308 276 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.73□□□□□ -2.13
TFF3Q07654 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.73□□□□□ -2.13
TFF3Q07654 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.73□□□□□ -2.13
TFF3Q07654 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.73□□□□□ -2.13
TFF3Q07654 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.73□□□□□ -2.13
TFF3Q07654 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.73□□□□□ -2.13
TFF3Q07654 AC092954.1-201ENST00000609121 445 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 AL159169.2-201ENST00000610061 1269 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 AC092650.2-201ENST00000619984 902 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.73□□□□□ -2.13
TFF3Q07654 ADAM3A-203ENST00000461344 2157 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 MTND4P1-201ENST00000457501 1466 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.73□□□□□ -2.13
TFF3Q07654 AC080128.1-201ENST00000474389 1917 ntBASIC1.73□□□□□ -2.13
TFF3Q07654 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TFF3Q07654 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TFF3Q07654 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.72□□□□□ -2.13
TFF3Q07654 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TFF3Q07654 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TFF3Q07654 Y_RNA.164-201ENST00000363709 102 ntBASIC1.72□□□□□ -2.13
TFF3Q07654 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 RNU6-603P-201ENST00000411403 107 ntBASIC1.72□□□□□ -2.13
TFF3Q07654 RPL23AP36-201ENST00000413895 458 ntBASIC1.72□□□□□ -2.13
TFF3Q07654 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.72□□□□□ -2.13
TFF3Q07654 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.72□□□□□ -2.13
TFF3Q07654 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
TFF3Q07654 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.72□□□□□ -2.13
TFF3Q07654 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.72□□□□□ -2.13
TFF3Q07654 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.72□□□□□ -2.13
TFF3Q07654 AC128687.1-201ENST00000605304 619 ntBASIC1.72□□□□□ -2.13
TFF3Q07654 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TFF3Q07654 AP005901.5-201ENST00000545779 1796 ntBASIC1.72□□□□□ -2.13
TFF3Q07654 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TFF3Q07654 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.72□□□□□ -2.13
TFF3Q07654 NSRP1P1-201ENST00000444067 1693 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.71□□□□□ -2.14
TFF3Q07654 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.71□□□□□ -2.14
TFF3Q07654 U3.15-201ENST00000365398 212 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TFF3Q07654 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.71□□□□□ -2.14
TFF3Q07654 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.71□□□□□ -2.14
TFF3Q07654 AC027124.2-201ENST00000428249 105 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 AL157827.1-201ENST00000447622 132 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 AC005912.1-201ENST00000495392 255 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 RNU1-40P-201ENST00000516816 164 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 RNU1-97P-201ENST00000516872 164 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 snoZ278.1-201ENST00000517059 112 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.71□□□□□ -2.14
TFF3Q07654 GNAI2P1-201ENST00000541815 315 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.71□□□□□ -2.14
TFF3Q07654 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 AC002984.1-201ENST00000591692 448 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 AC011468.4-201ENST00000603942 409 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 AP003117.2-201ENST00000606010 545 ntBASIC1.71□□□□□ -2.14
TFF3Q07654 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TFF3Q07654 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TFF3Q07654 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.71□□□□□ -2.14
TFF3Q07654 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TFF3Q07654 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TFF3Q07654 AC010680.1-201ENST00000590024 3590 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 RNU4-52P-201ENST00000384209 138 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 RNU6-14P-201ENST00000384630 106 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TFF3Q07654 LUZP4P1-201ENST00000415420 344 ntBASIC1.7□□□□□ -2.14
TFF3Q07654 AC008173.1-201ENST00000418901 264 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms